Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC007919.1-201ENST00000429380 217 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5□□□□□ -1.61
CCDC116Q8IYX3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC116Q8IYX3 AL391987.1-201ENST00000441025 200 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5□□□□□ -1.61
CCDC116Q8IYX3 AC091179.1-201ENST00000461606 579 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 RPL31P13-201ENST00000484151 370 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 AL136038.1-201ENST00000497246 351 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 YWHAEP4-201ENST00000505390 198 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5□□□□□ -1.61
CCDC116Q8IYX3 MIR3145-201ENST00000580727 82 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 AC109309.2-201ENST00000612597 332 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 LINC00901.1-201ENST00000617252 152 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5□□□□□ -1.61
CCDC116Q8IYX3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC116Q8IYX3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5□□□□□ -1.61
CCDC116Q8IYX3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC116Q8IYX3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC116Q8IYX3 AC092593.1-201ENST00000515413 1815 ntBASIC5□□□□□ -1.61
CCDC116Q8IYX3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 RNU6-239P-201ENST00000390990 99 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 RN7SKP229-201ENST00000410465 302 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AL138785.1-201ENST00000425821 331 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC098614.2-201ENST00000426040 255 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 RPS11P7-201ENST00000442125 465 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 IFNWP4-201ENST00000453148 294 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 RN7SL174P-201ENST00000475578 289 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 SNORD116-26-201ENST00000516006 96 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC027308.1-201ENST00000517993 110 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC011487.3-201ENST00000593607 453 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 AC074101.1-201ENST00000637861 241 ntBASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC116Q8IYX3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 FTLP6-201ENST00000355274 422 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 MIR105-1-201ENST00000385222 81 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 SNORA48.4-201ENST00000391089 134 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AC009804.1-201ENST00000400949 179 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RNU2-52P-201ENST00000410680 190 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RPL7AP25-201ENST00000423357 805 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RPS15AP5-201ENST00000436276 388 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 CR769767.1-201ENST00000436337 346 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RN7SL447P-201ENST00000494711 245 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 SNRPCP2-201ENST00000504370 475 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AC097462.2-201ENST00000504623 481 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RNA5SP362-201ENST00000516048 118 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RNA5SP360-201ENST00000516555 118 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RNA5SP373-201ENST00000517271 95 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AC112693.2-201ENST00000556538 232 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 RPL10P14-201ENST00000565265 298 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 AL162431.4-201ENST00000604674 411 ntBASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CCDC116Q8IYX3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC099654.2-201ENST00000433031 1980 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RNU6-1272P-201ENST00000362776 107 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RNU6-137P-201ENST00000363680 108 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms