Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HERC6Q8IVU3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 API5P2-201ENST00000397055 1498 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 FTLP6-201ENST00000355274 422 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 RNU4-48P-201ENST00000365559 182 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 RNU6-217P-201ENST00000384164 104 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 RNU6-74P-201ENST00000384235 107 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 SNORA24.1-201ENST00000384401 135 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 MIR1-2-201ENST00000384961 85 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 MIR454-201ENST00000390180 115 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 RNU2-68P-201ENST00000410878 191 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AF274854.1-201ENST00000413236 615 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AC114491.1-201ENST00000416095 246 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 MTATP6P16-201ENST00000434543 526 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 DPPA3P1-201ENST00000448050 469 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AL135752.1-201ENST00000479477 471 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 RPL37P25-201ENST00000507308 276 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 SNORD59.2-201ENST00000516873 68 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 RANP3-201ENST00000530970 276 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AP003034.1-201ENST00000534621 422 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 H3F3AP1-201ENST00000559984 334 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AC022893.3-201ENST00000607665 437 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 AC124864.2-201ENST00000624736 186 ntBASIC3.5□□□□□ -1.85
HERC6Q8IVU3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HERC6Q8IVU3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 SNORA7.4-201ENST00000384249 137 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 Y_RNA.481-201ENST00000384373 102 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RNU6-606P-201ENST00000384721 111 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RNU6-55P-201ENST00000411092 107 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RNU6-954P-201ENST00000411355 107 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 MTND3P21-201ENST00000433774 331 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 SNRPEP9-201ENST00000436794 238 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AC008264.1-201ENST00000447612 367 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AC006539.3-201ENST00000454258 129 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AC010401.1-201ENST00000463867 348 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RPL9P6-201ENST00000492764 598 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RNU6-928P-201ENST00000516876 104 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 RNA5SP471-201ENST00000516971 106 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 OR5B19P-201ENST00000531766 928 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 EIF1P4-201ENST00000572664 335 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 UBL5P2-201ENST00000583788 219 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 FTX_3.1-201ENST00000610451 147 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 MIR6863-201ENST00000636112 90 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
HERC6Q8IVU3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HERC6Q8IVU3 AC017071.1-201ENST00000564407 2204 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 RNU1-70P-201ENST00000362618 164 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 EI24P2-201ENST00000397776 1076 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 OR51A5P-201ENST00000415429 942 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 RPS3AP44-201ENST00000425466 790 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 ISCA1P1-201ENST00000426679 387 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 RPL7P5-201ENST00000471472 736 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 RNA5SP356-201ENST00000515972 94 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 SNORD27.1-201ENST00000516319 72 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms