Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC080128.1-201ENST00000474389 1917 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL391994.1-201ENST00000254724 282 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 Y_RNA.46-201ENST00000362695 102 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-253P-201ENST00000384730 105 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-220P-201ENST00000390919 107 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RNA5SP184-201ENST00000411071 108 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RPL26P27-201ENST00000414397 437 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC096649.2-201ENST00000416186 393 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 SEPT2P1-201ENST00000419651 180 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 ISCA1P1-201ENST00000426679 387 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC104651.1-201ENST00000427559 735 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 HMGB1P9-201ENST00000429856 646 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 MTCO1P42-201ENST00000457379 726 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RPL37P6-201ENST00000460682 294 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC004263.1-201ENST00000479327 332 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AP006587.4-201ENST00000526053 529 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC135628.1-201ENST00000568867 534 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 RPS3AP23-202ENST00000574601 686 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC024619.4-201ENST00000580924 316 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 MIR4999-201ENST00000585029 91 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL033523.1-201ENST00000605153 153 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC107214.2-201ENST00000608204 634 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL589743.7-201ENST00000612637 233 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 DUSP12P1-201ENST00000612874 516 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL031667.3-201ENST00000620124 655 ntBASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUDCD3Q8IVD9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 Y_RNA.18-201ENST00000362461 102 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 SNORA38-201ENST00000363946 132 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-660P-201ENST00000364566 109 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 RNU6-701P-201ENST00000384059 107 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AL021407.1-201ENST00000404531 386 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 ZNF90P2-204ENST00000419323 1075 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 OSTCP8-201ENST00000445117 448 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AL121769.1-201ENST00000469473 401 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 RN7SL432P-201ENST00000484057 298 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 SNORA31.6-201ENST00000516241 130 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC023050.2-201ENST00000544968 387 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 NACAP3-201ENST00000552100 481 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC090888.2-201ENST00000559765 1144 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC106782.4-201ENST00000568264 210 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC006023.1-201ENST00000603944 259 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC108747.1-201ENST00000609508 535 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC090970.3-201ENST00000612566 866 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC025594.3-201ENST00000613068 790 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 MIR3199-2-201ENST00000636243 86 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AC004520.1-201ENST00000608362 1413 ntBASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
NUDCD3Q8IVD9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
NUDCD3Q8IVD9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC062016.1-201ENST00000355719 319 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 RNA5SP68-201ENST00000363885 119 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-14P-201ENST00000384630 106 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 U8.14-201ENST00000390843 143 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 RNU6-920P-201ENST00000410926 92 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AL353729.1-201ENST00000425044 720 ntBASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.21□□□□□ -2.06
NUDCD3Q8IVD9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms