Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 Z82210.1-201ENST00000440037 231 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 AC073587.1-201ENST00000447093 876 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 RN7SL319P-201ENST00000480656 221 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 AC022968.1-201ENST00000567372 442 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 MIR3936-201ENST00000584304 110 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 AP002826.1-201ENST00000608835 315 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 uc_338.7-201ENST00000621834 124 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 snoZ196.1-201ENST00000625269 89 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 AC022893.2-201ENST00000564832 3296 ntBASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.39□□□□□ -1.55
CTC1Q2NKJ3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC100778.3-201ENST00000580060 1750 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RNA5SP191-201ENST00000362585 102 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RNU6-626P-201ENST00000363354 107 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 Y_RNA.172-201ENST00000363765 102 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 Y_RNA.495-201ENST00000384435 112 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RNU6-843P-201ENST00000384454 104 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 SNORD56.6-201ENST00000384569 71 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RPL21P67-201ENST00000402896 478 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RNY4P29-201ENST00000410801 97 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC099677.1-201ENST00000420575 175 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RPL12P46-201ENST00000436610 195 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 USP9YP7-201ENST00000436723 430 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 USP9YP32-201ENST00000452432 430 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 RN7SKP21-201ENST00000516503 220 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 CR383656.7-201ENST00000548164 174 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 BNIP3P5-201ENST00000562290 498 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC023043.3-201ENST00000593113 385 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC005046.1-201ENST00000608515 625 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AC244107.2-201ENST00000611773 76 ntBASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTC1Q2NKJ3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 AL672167.1-205ENST00000641112 3080 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RNA5SP361-201ENST00000362686 118 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RNA5SP479-201ENST00000364858 117 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RNU6-20P-201ENST00000384106 107 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 SNORA26.2-201ENST00000390922 122 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RNU6-821P-201ENST00000390995 107 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RNU6-817P-201ENST00000391083 104 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RN7SKP27-201ENST00000410684 333 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 AL096701.2-201ENST00000416920 238 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 AF186996.5-201ENST00000418098 904 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RPL21P126-201ENST00000470049 478 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 RN7SKP122-201ENST00000515923 296 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 MIR4431-201ENST00000579990 94 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 AL034351.1-201ENST00000605288 668 ntBASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.37□□□□□ -1.55
CTC1Q2NKJ3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 AC004817.4-201ENST00000602396 3625 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 RNU6-263P-201ENST00000363811 107 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 RNU6-460P-201ENST00000391158 108 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 MIR298-201ENST00000401212 88 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 AC063976.4-201ENST00000421971 163 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 AL138785.1-201ENST00000425821 331 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 RPL26P26-201ENST00000480251 434 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms