Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.26□□□□□ -2.21
HMGXB3Q12766 FTH1P15-201ENST00000406984 280 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.26□□□□□ -2.21
HMGXB3Q12766 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HMGXB3Q12766 RPL7L1P10-201ENST00000427790 463 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 TPTE2P6-202ENST00000445572 1007 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.26□□□□□ -2.21
HMGXB3Q12766 RNU6-351P-201ENST00000516097 100 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 RNU6-496P-201ENST00000516145 99 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.26□□□□□ -2.21
HMGXB3Q12766 AC090666.1-201ENST00000578241 445 ntBASIC1.26□□□□□ -2.21
HMGXB3Q12766 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
HMGXB3Q12766 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
HMGXB3Q12766 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 U3.29-201ENST00000391296 212 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 RN7SKP61-201ENST00000410642 295 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 CST2P1-201ENST00000425770 87 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC111000.5-201ENST00000506559 1178 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC012254.4-201ENST00000588843 273 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 SNORD14A-201ENST00000606526 91 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMGXB3Q12766 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMGXB3Q12766 Y_RNA.549-201ENST00000384657 102 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 U8.14-201ENST00000390843 143 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 MIR1265-201ENST00000408444 86 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 HMGB3P31-201ENST00000413333 595 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AL365496.1-201ENST00000426885 215 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC104108.1-201ENST00000509930 412 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 RNU6-928P-201ENST00000516876 104 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC074029.2-201ENST00000551045 634 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.25□□□□□ -2.21
HMGXB3Q12766 AC079395.3-201ENST00000615161 484 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 U6.48-201ENST00000618523 106 ntBASIC1.25□□□□□ -2.21
HMGXB3Q12766 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGXB3Q12766 Y_RNA.412-201ENST00000384001 104 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 AL161449.1-201ENST00000414531 1199 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGXB3Q12766 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGXB3Q12766 AL034418.1-201ENST00000448675 860 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 RPS15AP27-201ENST00000449183 343 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGXB3Q12766 MIR3609-201ENST00000582661 80 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 AC078899.2-201ENST00000595282 212 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 AL109918.3-201ENST00000603072 338 ntBASIC1.24□□□□□ -2.21
HMGXB3Q12766 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGXB3Q12766 AC007785.2-201ENST00000598627 1916 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 RNA5SP347-201ENST00000362445 119 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 RNU6-1249P-201ENST00000363237 111 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 RNU6-1243P-201ENST00000364028 107 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 U3.20-201ENST00000390909 217 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 RNA5SP56-201ENST00000410277 118 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 SEPT2P1-201ENST00000419651 180 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 AC006548.1-201ENST00000427470 102 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGXB3Q12766 OSTCP8-201ENST00000445117 448 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 BX248409.1-201ENST00000455497 255 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 AL359385.1-201ENST00000456509 365 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HMGXB3Q12766 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGXB3Q12766 AP000254.1-201ENST00000609934 520 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 CR381572.1-201ENST00000625098 102 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 AL356473.1-201ENST00000406203 1408 ntBASIC1.23□□□□□ -2.21
HMGXB3Q12766 SDAD1P2-201ENST00000441308 2028 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 RNA5SP258-201ENST00000362750 119 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 MIR767-201ENST00000390228 109 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 OR6C72P-201ENST00000451403 892 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 BOLA3P3-201ENST00000505182 232 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 COL6A4P2-205ENST00000509855 506 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 RNU7-193P-201ENST00000516723 65 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.22□□□□□ -2.21
HMGXB3Q12766 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.22□□□□□ -2.21
HMGXB3Q12766 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGXB3Q12766 AC025165.5-201ENST00000602802 578 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 AC097372.4-201ENST00000625025 466 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 AC004808.1-201ENST00000627671 721 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 ELL2P3-201ENST00000457883 1602 ntBASIC1.22□□□□□ -2.21
HMGXB3Q12766 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGXB3Q12766 RNU1-23P-201ENST00000363361 144 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 RNU4-31P-201ENST00000384211 141 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 MIR493-201ENST00000385254 89 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 AL356432.1-201ENST00000405809 419 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 OFD1P18Y-201ENST00000420889 959 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 XKRYP1-201ENST00000423438 492 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 XKRYP2-201ENST00000432915 492 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 AC092628.1-201ENST00000436250 252 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGXB3Q12766 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGXB3Q12766 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGXB3Q12766 AC104689.1-201ENST00000473356 768 ntBASIC1.21□□□□□ -2.22
HMGXB3Q12766 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms