Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ZYXP1-201ENST00000617638 118 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC006338.1-201ENST00000618453 749 ntBASIC0.86□□□□□ -2.27
RPS28P62857 AC019226.1-201ENST00000625666 515 ntBASIC0.86□□□□□ -2.27
RPS28P62857 MIR6830-201ENST00000636015 70 ntBASIC0.86□□□□□ -2.27
RPS28P62857 SNORA62.1-201ENST00000364287 154 ntBASIC0.85□□□□□ -2.27
RPS28P62857 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
RPS28P62857 MIR1178-201ENST00000408396 91 ntBASIC0.85□□□□□ -2.27
RPS28P62857 RNU2-20P-201ENST00000410425 191 ntBASIC0.85□□□□□ -2.27
RPS28P62857 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.85□□□□□ -2.27
RPS28P62857 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.85□□□□□ -2.27
RPS28P62857 MTCO2P5-201ENST00000422621 426 ntBASIC0.85□□□□□ -2.27
RPS28P62857 VN1R42P-201ENST00000424651 344 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AL513185.2-201ENST00000425543 193 ntBASIC0.85□□□□□ -2.27
RPS28P62857 RPS27P16-201ENST00000425758 201 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.85□□□□□ -2.27
RPS28P62857 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.85□□□□□ -2.27
RPS28P62857 AC092427.1-201ENST00000439177 601 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AC096638.1-201ENST00000444678 216 ntBASIC0.85□□□□□ -2.27
RPS28P62857 Z75741.1-201ENST00000446793 314 ntBASIC0.85□□□□□ -2.27
RPS28P62857 PPIAP20-201ENST00000449839 135 ntBASIC0.85□□□□□ -2.27
RPS28P62857 GTF2IP12-201ENST00000456547 356 ntBASIC0.85□□□□□ -2.27
RPS28P62857 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC0.85□□□□□ -2.27
RPS28P62857 TMEM251P1-201ENST00000503717 318 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AC109329.1-201ENST00000518744 317 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AP003392.2-201ENST00000527269 208 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AP004247.1-201ENST00000531556 1289 ntBASIC0.85□□□□□ -2.27
RPS28P62857 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.85□□□□□ -2.27
RPS28P62857 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.85□□□□□ -2.27
RPS28P62857 AC093249.1-201ENST00000567049 203 ntBASIC0.85□□□□□ -2.27
RPS28P62857 MIR4637-201ENST00000582405 84 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AC123912.5-201ENST00000605470 343 ntBASIC0.85□□□□□ -2.27
RPS28P62857 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC0.85□□□□□ -2.27
RPS28P62857 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.85□□□□□ -2.27
RPS28P62857 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
RPS28P62857 MIR518C-201ENST00000384822 101 ntBASIC0.84□□□□□ -2.27
RPS28P62857 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
RPS28P62857 AL049693.1-201ENST00000402760 611 ntBASIC0.84□□□□□ -2.27
RPS28P62857 AL139156.1-201ENST00000412785 841 ntBASIC0.84□□□□□ -2.27
RPS28P62857 RPL23AP36-201ENST00000413895 458 ntBASIC0.84□□□□□ -2.27
RPS28P62857 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC0.84□□□□□ -2.27
RPS28P62857 RPL39P29-201ENST00000447779 157 ntBASIC0.84□□□□□ -2.27
RPS28P62857 RNU7-140P-201ENST00000459546 60 ntBASIC0.84□□□□□ -2.27
RPS28P62857 TSACC-207ENST00000470342 601 ntTSL 2 BASIC0.84□□□□□ -2.27
RPS28P62857 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.84□□□□□ -2.27
RPS28P62857 RPS29P22-201ENST00000472363 168 ntBASIC0.84□□□□□ -2.27
RPS28P62857 NDUFA5P9-201ENST00000472609 340 ntBASIC0.84□□□□□ -2.27
RPS28P62857 RPL21P47-201ENST00000483696 477 ntBASIC0.84□□□□□ -2.27
RPS28P62857 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC0.84□□□□□ -2.27
RPS28P62857 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.84□□□□□ -2.27
RPS28P62857 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
RPS28P62857 RNVU1-2-201ENST00000516326 135 ntBASIC0.84□□□□□ -2.27
RPS28P62857 AC026403.1-201ENST00000518938 295 ntBASIC0.84□□□□□ -2.27
RPS28P62857 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.84□□□□□ -2.27
RPS28P62857 AC012414.6-201ENST00000568241 401 ntBASIC0.84□□□□□ -2.27
RPS28P62857 MIR744-201ENST00000578242 98 ntBASIC0.84□□□□□ -2.27
RPS28P62857 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.84□□□□□ -2.27
RPS28P62857 WISP1-OT1-201ENST00000602893 642 ntBASIC0.84□□□□□ -2.27
RPS28P62857 AL050343.2-201ENST00000607338 280 ntBASIC0.84□□□□□ -2.27
RPS28P62857 AC046143.2-201ENST00000609789 160 ntBASIC0.84□□□□□ -2.27
RPS28P62857 AL078604.3-201ENST00000615580 211 ntBASIC0.84□□□□□ -2.27
RPS28P62857 AC009268.2-201ENST00000621925 457 ntBASIC0.84□□□□□ -2.27
RPS28P62857 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
RPS28P62857 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
RPS28P62857 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPS28P62857 RNU6-859P-201ENST00000362728 107 ntBASIC0.83□□□□□ -2.28
RPS28P62857 SUGT1P1-201ENST00000379514 476 ntBASIC0.83□□□□□ -2.28
RPS28P62857 RNU6-546P-201ENST00000383991 107 ntBASIC0.83□□□□□ -2.28
RPS28P62857 RNU6-1222P-201ENST00000384615 107 ntBASIC0.83□□□□□ -2.28
RPS28P62857 RNVU1-14-201ENST00000384770 164 ntBASIC0.83□□□□□ -2.28
RPS28P62857 MIR217-201ENST00000384817 110 ntBASIC0.83□□□□□ -2.28
RPS28P62857 MIR585-201ENST00000384887 94 ntBASIC0.83□□□□□ -2.28
RPS28P62857 SRIP3-201ENST00000413200 219 ntBASIC0.83□□□□□ -2.28
RPS28P62857 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS28P62857 AL590623.1-201ENST00000427864 105 ntBASIC0.83□□□□□ -2.28
RPS28P62857 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC0.83□□□□□ -2.28
RPS28P62857 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.83□□□□□ -2.28
RPS28P62857 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS28P62857 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS28P62857 RN7SL610P-201ENST00000463845 291 ntBASIC0.83□□□□□ -2.28
RPS28P62857 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
RPS28P62857 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS28P62857 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.83□□□□□ -2.28
RPS28P62857 AC116655.1-201ENST00000508324 901 ntBASIC0.83□□□□□ -2.28
RPS28P62857 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS28P62857 RNU6-390P-201ENST00000516259 103 ntBASIC0.83□□□□□ -2.28
RPS28P62857 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC0.83□□□□□ -2.28
RPS28P62857 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.83□□□□□ -2.28
RPS28P62857 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.83□□□□□ -2.28
RPS28P62857 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.83□□□□□ -2.28
RPS28P62857 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.83□□□□□ -2.28
RPS28P62857 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC0.83□□□□□ -2.28
RPS28P62857 AL161798.1-201ENST00000604630 131 ntBASIC0.83□□□□□ -2.28
RPS28P62857 RNU6-91P-201ENST00000607774 107 ntBASIC0.83□□□□□ -2.28
RPS28P62857 AL355472.4-201ENST00000610233 626 ntBASIC0.83□□□□□ -2.28
RPS28P62857 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.83□□□□□ -2.28
RPS28P62857 U6.99-201ENST00000637524 83 ntBASIC0.83□□□□□ -2.28
RPS28P62857 ATP8A2P3-201ENST00000426792 1536 ntBASIC0.83□□□□□ -2.28
RPS28P62857 ICE2P2-201ENST00000483823 2787 ntBASIC0.83□□□□□ -2.28
RPS28P62857 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPS28P62857 MIR422A-201ENST00000362286 90 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms