Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL691517.1-201ENST00000440833 1235 ntBASIC1.31□□□□□ -2.2
VBP1P61758 MTND3P4-201ENST00000453537 303 ntBASIC1.31□□□□□ -2.2
VBP1P61758 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.31□□□□□ -2.2
VBP1P61758 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.31□□□□□ -2.2
VBP1P61758 AC118282.2-201ENST00000508739 374 ntBASIC1.31□□□□□ -2.2
VBP1P61758 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.31□□□□□ -2.2
VBP1P61758 SNORA25.11-201ENST00000515935 105 ntBASIC1.31□□□□□ -2.2
VBP1P61758 SNORA48.9-201ENST00000516419 162 ntBASIC1.31□□□□□ -2.2
VBP1P61758 RNU1-103P-201ENST00000516502 125 ntBASIC1.31□□□□□ -2.2
VBP1P61758 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.31□□□□□ -2.2
VBP1P61758 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VBP1P61758 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.31□□□□□ -2.2
VBP1P61758 MIR3162-201ENST00000581818 82 ntBASIC1.31□□□□□ -2.2
VBP1P61758 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.31□□□□□ -2.2
VBP1P61758 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
VBP1P61758 MIR8081-201ENST00000611533 95 ntBASIC1.31□□□□□ -2.2
VBP1P61758 AC017037.3-201ENST00000625016 472 ntBASIC1.31□□□□□ -2.2
VBP1P61758 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.31□□□□□ -2.2
VBP1P61758 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VBP1P61758 ZNF680P1-201ENST00000436625 1469 ntBASIC1.31□□□□□ -2.2
VBP1P61758 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
VBP1P61758 MIR491-201ENST00000384877 84 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL591034.2-201ENST00000402839 359 ntBASIC1.3□□□□□ -2.2
VBP1P61758 RN7SKP223-201ENST00000410582 62 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.3□□□□□ -2.2
VBP1P61758 AL353621.1-201ENST00000418219 243 ntBASIC1.3□□□□□ -2.2
VBP1P61758 Z98742.3-201ENST00000418637 326 ntBASIC1.3□□□□□ -2.2
VBP1P61758 MTCO3P1-205ENST00000422088 832 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL353706.1-201ENST00000436728 494 ntBASIC1.3□□□□□ -2.2
VBP1P61758 MTCO2P20-201ENST00000437339 673 ntBASIC1.3□□□□□ -2.2
VBP1P61758 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.3□□□□□ -2.2
VBP1P61758 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
VBP1P61758 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.3□□□□□ -2.2
VBP1P61758 AC079448.1-201ENST00000449377 373 ntBASIC1.3□□□□□ -2.2
VBP1P61758 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VBP1P61758 RPL31P58-201ENST00000469001 379 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC008837.1-201ENST00000511513 412 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC005832.3-201ENST00000537929 631 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL121821.2-201ENST00000556081 394 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL713866.2-201ENST00000603579 219 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL355598.1-201ENST00000604169 202 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC021646.1-201ENST00000605469 484 ntBASIC1.3□□□□□ -2.2
VBP1P61758 MIR502-201ENST00000606349 86 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC239803.2-201ENST00000610161 430 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC087241.4-201ENST00000612441 480 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL359314.1-201ENST00000616913 261 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AL596245.1-201ENST00000618994 362 ntBASIC1.3□□□□□ -2.2
VBP1P61758 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.3□□□□□ -2.2
VBP1P61758 HPVC1-201ENST00000629899 1198 ntBASIC1.3□□□□□ -2.2
VBP1P61758 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
VBP1P61758 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VBP1P61758 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VBP1P61758 SNORD115-3-201ENST00000363100 82 ntBASIC1.29□□□□□ -2.2
VBP1P61758 RNU6-839P-201ENST00000363347 108 ntBASIC1.29□□□□□ -2.2
VBP1P61758 RNU1-57P-201ENST00000384491 166 ntBASIC1.29□□□□□ -2.2
VBP1P61758 SNORA40.18-201ENST00000391200 128 ntBASIC1.29□□□□□ -2.2
VBP1P61758 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
VBP1P61758 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.29□□□□□ -2.2
VBP1P61758 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.29□□□□□ -2.2
VBP1P61758 AC006946.1-201ENST00000429106 328 ntBASIC1.29□□□□□ -2.2
VBP1P61758 PTENP1-201ENST00000447117 1215 ntBASIC1.29□□□□□ -2.2
VBP1P61758 SSXP1-201ENST00000453640 473 ntBASIC1.29□□□□□ -2.2
VBP1P61758 AMD1P1-201ENST00000457220 922 ntBASIC1.29□□□□□ -2.2
VBP1P61758 AC099513.1-201ENST00000490423 301 ntBASIC1.29□□□□□ -2.2
VBP1P61758 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.29□□□□□ -2.2
VBP1P61758 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.29□□□□□ -2.2
VBP1P61758 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
VBP1P61758 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.29□□□□□ -2.2
VBP1P61758 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.29□□□□□ -2.2
VBP1P61758 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
VBP1P61758 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.29□□□□□ -2.2
VBP1P61758 RMST_10.1-201ENST00000616309 154 ntBASIC1.29□□□□□ -2.2
VBP1P61758 AC079416.3-201ENST00000624479 549 ntBASIC1.29□□□□□ -2.2
VBP1P61758 AC005539.1-201ENST00000443768 1479 ntBASIC1.29□□□□□ -2.2
VBP1P61758 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VBP1P61758 RBBP8P1-201ENST00000449447 1844 ntBASIC1.29□□□□□ -2.2
VBP1P61758 RNU6-661P-201ENST00000362409 107 ntBASIC1.28□□□□□ -2.2
VBP1P61758 RNU1-23P-201ENST00000363361 144 ntBASIC1.28□□□□□ -2.2
VBP1P61758 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AL133264.1-201ENST00000407157 562 ntBASIC1.28□□□□□ -2.2
VBP1P61758 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AC127391.1-201ENST00000411737 98 ntBASIC1.28□□□□□ -2.2
VBP1P61758 TPMTP3-201ENST00000411928 735 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.28□□□□□ -2.2
VBP1P61758 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.28□□□□□ -2.2
VBP1P61758 Z93242.1-201ENST00000427102 353 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.28□□□□□ -2.2
VBP1P61758 FAM103A2P-201ENST00000444122 354 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.28□□□□□ -2.2
VBP1P61758 ARPC3P5-201ENST00000448802 534 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AL590365.1-201ENST00000450788 243 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.28□□□□□ -2.2
VBP1P61758 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.28□□□□□ -2.2
VBP1P61758 BX322784.1-201ENST00000455793 1077 ntBASIC1.28□□□□□ -2.2
VBP1P61758 RPL31P50-201ENST00000471002 296 ntBASIC1.28□□□□□ -2.2
VBP1P61758 RNU6-250P-201ENST00000516958 103 ntBASIC1.28□□□□□ -2.2
VBP1P61758 RRN3P3-201ENST00000549207 578 ntBASIC1.28□□□□□ -2.2
VBP1P61758 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
VBP1P61758 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.28□□□□□ -2.2
VBP1P61758 ELOCP5-201ENST00000604924 333 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms