Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL139415.2-201ENST00000431968 163 ntBASIC1.66□□□□□ -2.14
ACTBP60709 ELOCP7-201ENST00000439968 331 ntBASIC1.66□□□□□ -2.14
ACTBP60709 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.66□□□□□ -2.14
ACTBP60709 AL136380.1-201ENST00000447970 162 ntBASIC1.66□□□□□ -2.14
ACTBP60709 AC013267.1-201ENST00000458227 267 ntBASIC1.66□□□□□ -2.14
ACTBP60709 AC087884.1-201ENST00000469738 328 ntBASIC1.66□□□□□ -2.14
ACTBP60709 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.66□□□□□ -2.14
ACTBP60709 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
ACTBP60709 RPL9P6-201ENST00000492764 598 ntBASIC1.66□□□□□ -2.14
ACTBP60709 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.66□□□□□ -2.14
ACTBP60709 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ACTBP60709 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
ACTBP60709 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.66□□□□□ -2.14
ACTBP60709 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.66□□□□□ -2.14
ACTBP60709 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.66□□□□□ -2.14
ACTBP60709 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.66□□□□□ -2.14
ACTBP60709 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.66□□□□□ -2.14
ACTBP60709 RPP40P2-201ENST00000603596 712 ntBASIC1.66□□□□□ -2.14
ACTBP60709 MIR5739-201ENST00000619803 80 ntBASIC1.66□□□□□ -2.14
ACTBP60709 AP003485.1-201ENST00000625093 753 ntBASIC1.66□□□□□ -2.14
ACTBP60709 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.66□□□□□ -2.14
ACTBP60709 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.66□□□□□ -2.14
ACTBP60709 MIR219B-201ENST00000637023 88 ntBASIC1.66□□□□□ -2.14
ACTBP60709 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ACTBP60709 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ACTBP60709 snoZ40.1-201ENST00000364540 72 ntBASIC1.65□□□□□ -2.15
ACTBP60709 SNORA64-201ENST00000384674 134 ntBASIC1.65□□□□□ -2.15
ACTBP60709 RNU6-114P-201ENST00000384704 105 ntBASIC1.65□□□□□ -2.15
ACTBP60709 RNU6-253P-201ENST00000384730 105 ntBASIC1.65□□□□□ -2.15
ACTBP60709 TXNP7-201ENST00000406296 293 ntBASIC1.65□□□□□ -2.15
ACTBP60709 RNU6-516P-201ENST00000411381 104 ntBASIC1.65□□□□□ -2.15
ACTBP60709 RPL26P27-201ENST00000414397 437 ntBASIC1.65□□□□□ -2.15
ACTBP60709 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTBP60709 MTND1P28-201ENST00000435623 950 ntBASIC1.65□□□□□ -2.15
ACTBP60709 MTND5P14-201ENST00000441481 1267 ntBASIC1.65□□□□□ -2.15
ACTBP60709 FAM103A2P-201ENST00000444122 354 ntBASIC1.65□□□□□ -2.15
ACTBP60709 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.65□□□□□ -2.15
ACTBP60709 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.65□□□□□ -2.15
ACTBP60709 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTBP60709 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.65□□□□□ -2.15
ACTBP60709 AC027575.1-201ENST00000481064 460 ntBASIC1.65□□□□□ -2.15
ACTBP60709 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.65□□□□□ -2.15
ACTBP60709 RNU6-927P-201ENST00000516199 100 ntBASIC1.65□□□□□ -2.15
ACTBP60709 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.65□□□□□ -2.15
ACTBP60709 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
ACTBP60709 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.65□□□□□ -2.15
ACTBP60709 AC004805.2-201ENST00000605382 482 ntBASIC1.65□□□□□ -2.15
ACTBP60709 AP002802.2-201ENST00000605877 235 ntBASIC1.65□□□□□ -2.15
ACTBP60709 AL356266.1-201ENST00000623311 483 ntBASIC1.65□□□□□ -2.15
ACTBP60709 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ACTBP60709 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ACTBP60709 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ACTBP60709 RNU6-234P-201ENST00000365229 104 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AL023284.1-201ENST00000403956 276 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AL139156.1-201ENST00000412785 841 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.64□□□□□ -2.15
ACTBP60709 EIF1AXP1-201ENST00000419267 435 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.64□□□□□ -2.15
ACTBP60709 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.64□□□□□ -2.15
ACTBP60709 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.64□□□□□ -2.15
ACTBP60709 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 RNU6-1028P-201ENST00000517164 93 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.64□□□□□ -2.15
ACTBP60709 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.64□□□□□ -2.15
ACTBP60709 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 IGKV3-31-201ENST00000523109 329 ntBASIC1.64□□□□□ -2.15
ACTBP60709 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.64□□□□□ -2.15
ACTBP60709 AC012435.1-202ENST00000568772 240 ntBASIC1.64□□□□□ -2.15
ACTBP60709 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.64□□□□□ -2.15
ACTBP60709 BBIP1P1-201ENST00000602999 279 ntBASIC1.64□□□□□ -2.15
ACTBP60709 AC107075.1-201ENST00000613695 314 ntBASIC1.64□□□□□ -2.15
ACTBP60709 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.64□□□□□ -2.15
ACTBP60709 LINC02211-204ENST00000642024 1070 ntBASIC1.64□□□□□ -2.15
ACTBP60709 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ACTBP60709 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.64□□□□□ -2.15
ACTBP60709 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ACTBP60709 AC092447.10-201ENST00000620607 1652 ntBASIC1.64□□□□□ -2.15
ACTBP60709 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.63□□□□□ -2.15
ACTBP60709 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ACTBP60709 RNU6-223P-201ENST00000362830 107 ntBASIC1.63□□□□□ -2.15
ACTBP60709 SNORA67.3-201ENST00000384366 140 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.63□□□□□ -2.15
ACTBP60709 VN1R36P-201ENST00000414936 291 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
ACTBP60709 USP9YP26-201ENST00000421008 661 ntBASIC1.63□□□□□ -2.15
ACTBP60709 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.63□□□□□ -2.15
ACTBP60709 AC010153.1-201ENST00000432862 727 ntBASIC1.63□□□□□ -2.15
ACTBP60709 HMGB3P12-201ENST00000438745 556 ntBASIC1.63□□□□□ -2.15
ACTBP60709 MTCO3P45-201ENST00000443036 613 ntBASIC1.63□□□□□ -2.15
ACTBP60709 MTND6P13-201ENST00000443510 523 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AC020550.1-201ENST00000447385 163 ntBASIC1.63□□□□□ -2.15
ACTBP60709 MTND1P31-201ENST00000449206 961 ntBASIC1.63□□□□□ -2.15
ACTBP60709 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.63□□□□□ -2.15
ACTBP60709 AC117503.1-201ENST00000472241 394 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms