Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL354950.2-201ENST00000617939 290 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC012314.7-201ENST00000619693 93 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AL357559.1-201ENST00000622228 274 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.65□□□□□ -1.83
NEK3P51956 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.83
NEK3P51956 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.83
NEK3P51956 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NEK3P51956 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NEK3P51956 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
NEK3P51956 RNU6-552P-201ENST00000362869 119 ntBASIC3.64□□□□□ -1.83
NEK3P51956 RNU6-371P-201ENST00000364283 108 ntBASIC3.64□□□□□ -1.83
NEK3P51956 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
NEK3P51956 CD24P4-201ENST00000382840 243 ntBASIC3.64□□□□□ -1.83
NEK3P51956 RNU6-658P-201ENST00000384606 106 ntBASIC3.64□□□□□ -1.83
NEK3P51956 SAR1AP2-201ENST00000392696 594 ntBASIC3.64□□□□□ -1.83
NEK3P51956 RPL5P18-201ENST00000406671 891 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.64□□□□□ -1.83
NEK3P51956 AC093578.1-201ENST00000415219 368 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.64□□□□□ -1.83
NEK3P51956 RPL31P12-201ENST00000422587 358 ntBASIC3.64□□□□□ -1.83
NEK3P51956 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.64□□□□□ -1.83
NEK3P51956 RPL21P23-201ENST00000446654 460 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AC073415.1-201ENST00000449240 153 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AL118520.1-201ENST00000450770 291 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AC091153.1-201ENST00000466297 402 ntBASIC3.64□□□□□ -1.83
NEK3P51956 RPL23AP11-201ENST00000475260 469 ntBASIC3.64□□□□□ -1.83
NEK3P51956 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.64□□□□□ -1.83
NEK3P51956 AC010265.1-201ENST00000513509 211 ntBASIC3.64□□□□□ -1.83
NEK3P51956 RNU6-572P-201ENST00000516724 80 ntBASIC3.64□□□□□ -1.83
NEK3P51956 SNORA31.19-201ENST00000517079 126 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.64□□□□□ -1.83
NEK3P51956 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NEK3P51956 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.64□□□□□ -1.83
NEK3P51956 AC025678.1-201ENST00000567861 338 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.64□□□□□ -1.83
NEK3P51956 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.64□□□□□ -1.83
NEK3P51956 AC092954.2-201ENST00000609103 430 ntBASIC3.64□□□□□ -1.83
NEK3P51956 AC093788.1-201ENST00000609356 927 ntBASIC3.64□□□□□ -1.83
NEK3P51956 U6.99-201ENST00000637524 83 ntBASIC3.64□□□□□ -1.83
NEK3P51956 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.64□□□□□ -1.83
NEK3P51956 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEK3P51956 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEK3P51956 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NEK3P51956 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEK3P51956 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
NEK3P51956 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEK3P51956 CKAP2P1-201ENST00000555477 2049 ntBASIC3.63□□□□□ -1.83
NEK3P51956 Y_RNA.9-201ENST00000362354 101 ntBASIC3.63□□□□□ -1.83
NEK3P51956 SNORA63.1-201ENST00000362493 131 ntBASIC3.63□□□□□ -1.83
NEK3P51956 Y_RNA.372-201ENST00000365599 102 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEK3P51956 Y_RNA.409-201ENST00000383990 98 ntBASIC3.63□□□□□ -1.83
NEK3P51956 RNA5SP354-201ENST00000391247 136 ntBASIC3.63□□□□□ -1.83
NEK3P51956 RNU6-903P-201ENST00000391270 109 ntBASIC3.63□□□□□ -1.83
NEK3P51956 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEK3P51956 AC068050.1-201ENST00000394891 380 ntBASIC3.63□□□□□ -1.83
NEK3P51956 RNA5SP44-201ENST00000410446 133 ntBASIC3.63□□□□□ -1.83
NEK3P51956 RNU6-55P-201ENST00000411092 107 ntBASIC3.63□□□□□ -1.83
NEK3P51956 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AF274854.1-201ENST00000413236 615 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC096649.2-201ENST00000416186 393 ntBASIC3.63□□□□□ -1.83
NEK3P51956 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.63□□□□□ -1.83
NEK3P51956 RPS15AP5-201ENST00000436276 388 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.63□□□□□ -1.83
NEK3P51956 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.63□□□□□ -1.83
NEK3P51956 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.63□□□□□ -1.83
NEK3P51956 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.63□□□□□ -1.83
NEK3P51956 RNU6-1183P-201ENST00000517054 60 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AL137161.1-201ENST00000532231 390 ntBASIC3.63□□□□□ -1.83
NEK3P51956 OR5B10P-201ENST00000532869 642 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.63□□□□□ -1.83
NEK3P51956 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.63□□□□□ -1.83
NEK3P51956 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.63□□□□□ -1.83
NEK3P51956 AC027807.1-201ENST00000559921 996 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC136619.2-201ENST00000563361 631 ntBASIC3.63□□□□□ -1.83
NEK3P51956 MIR3922-201ENST00000585192 84 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC005498.1-201ENST00000592125 465 ntBASIC3.63□□□□□ -1.83
NEK3P51956 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.63□□□□□ -1.83
NEK3P51956 AL021997.1-201ENST00000605757 193 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC107294.3-201ENST00000609211 526 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC069200.1-201ENST00000609511 323 ntBASIC3.63□□□□□ -1.83
NEK3P51956 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
NEK3P51956 AC022149.2-201ENST00000621061 203 ntBASIC3.63□□□□□ -1.83
NEK3P51956 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NEK3P51956 HSPA8P4-201ENST00000511877 1920 ntBASIC3.63□□□□□ -1.83
NEK3P51956 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
NEK3P51956 AC092435.3-201ENST00000565538 3654 ntBASIC3.63□□□□□ -1.83
NEK3P51956 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEK3P51956 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEK3P51956 AC068647.1-201ENST00000489539 2265 ntBASIC3.63□□□□□ -1.83
NEK3P51956 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
NEK3P51956 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEK3P51956 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.62□□□□□ -1.83
NEK3P51956 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NEK3P51956 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NEK3P51956 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEK3P51956 MIR30E-201ENST00000362104 92 ntBASIC3.62□□□□□ -1.83
NEK3P51956 RNU6-166P-201ENST00000384371 107 ntBASIC3.62□□□□□ -1.83
NEK3P51956 MIR767-201ENST00000390228 109 ntBASIC3.62□□□□□ -1.83
NEK3P51956 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms