Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
USP11P51784 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP11P51784 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USP11P51784 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.82□□□□□ -1.64
USP11P51784 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP11P51784 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP11P51784 MIR383-201ENST00000362257 73 ntBASIC4.81□□□□□ -1.64
USP11P51784 RNU4-50P-201ENST00000364361 141 ntBASIC4.81□□□□□ -1.64
USP11P51784 Y_RNA.480-201ENST00000384364 102 ntBASIC4.81□□□□□ -1.64
USP11P51784 RNU6-130P-201ENST00000411112 103 ntBASIC4.81□□□□□ -1.64
USP11P51784 AL030996.1-201ENST00000411430 235 ntBASIC4.81□□□□□ -1.64
USP11P51784 AC099677.1-201ENST00000420575 175 ntBASIC4.81□□□□□ -1.64
USP11P51784 AC234775.1-201ENST00000454247 670 ntBASIC4.81□□□□□ -1.64
USP11P51784 AC108145.1-201ENST00000503770 153 ntBASIC4.81□□□□□ -1.64
USP11P51784 RNU6-390P-201ENST00000516259 103 ntBASIC4.81□□□□□ -1.64
USP11P51784 RNU6-677P-201ENST00000516914 101 ntBASIC4.81□□□□□ -1.64
USP11P51784 RNU7-4P-201ENST00000516961 62 ntBASIC4.81□□□□□ -1.64
USP11P51784 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.81□□□□□ -1.64
USP11P51784 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.81□□□□□ -1.64
USP11P51784 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.81□□□□□ -1.64
USP11P51784 AL160281.1-201ENST00000605307 311 ntBASIC4.81□□□□□ -1.64
USP11P51784 AL591516.1-201ENST00000611326 274 ntBASIC4.81□□□□□ -1.64
USP11P51784 AC004792.1-201ENST00000614523 137 ntBASIC4.81□□□□□ -1.64
USP11P51784 SNX18P1Y-201ENST00000616231 511 ntBASIC4.81□□□□□ -1.64
USP11P51784 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.81□□□□□ -1.64
USP11P51784 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.81□□□□□ -1.64
USP11P51784 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP11P51784 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.81□□□□□ -1.64
USP11P51784 AC027287.1-201ENST00000553115 1453 ntBASIC4.81□□□□□ -1.64
USP11P51784 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP11P51784 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP11P51784 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
USP11P51784 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
USP11P51784 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 RNU6-212P-201ENST00000362642 104 ntBASIC4.8□□□□□ -1.64
USP11P51784 RNU6-288P-201ENST00000363690 104 ntBASIC4.8□□□□□ -1.64
USP11P51784 Y_RNA.274-201ENST00000364714 101 ntBASIC4.8□□□□□ -1.64
USP11P51784 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
USP11P51784 RNU6-746P-201ENST00000384112 109 ntBASIC4.8□□□□□ -1.64
USP11P51784 MIR135A2-201ENST00000384854 100 ntBASIC4.8□□□□□ -1.64
USP11P51784 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 MIR1179-201ENST00000408703 91 ntBASIC4.8□□□□□ -1.64
USP11P51784 RPL21P90-201ENST00000415692 466 ntBASIC4.8□□□□□ -1.64
USP11P51784 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.8□□□□□ -1.64
USP11P51784 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.8□□□□□ -1.64
USP11P51784 NDUFB1P2-201ENST00000449477 176 ntBASIC4.8□□□□□ -1.64
USP11P51784 RNA5SP246-201ENST00000458909 119 ntBASIC4.8□□□□□ -1.64
USP11P51784 RPL37P6-202ENST00000464216 403 ntBASIC4.8□□□□□ -1.64
USP11P51784 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 Y_RNA.687-201ENST00000516558 91 ntBASIC4.8□□□□□ -1.64
USP11P51784 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.8□□□□□ -1.64
USP11P51784 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.8□□□□□ -1.64
USP11P51784 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.8□□□□□ -1.64
USP11P51784 AC006023.2-201ENST00000609916 167 ntBASIC4.8□□□□□ -1.64
USP11P51784 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.8□□□□□ -1.64
USP11P51784 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.8□□□□□ -1.64
USP11P51784 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP11P51784 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP11P51784 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
USP11P51784 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.79□□□□□ -1.64
USP11P51784 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.79□□□□□ -1.64
USP11P51784 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 RNU6-611P-201ENST00000384276 104 ntBASIC4.79□□□□□ -1.64
USP11P51784 RNU6-886P-201ENST00000384319 105 ntBASIC4.79□□□□□ -1.64
USP11P51784 Y_RNA.526-201ENST00000384572 110 ntBASIC4.79□□□□□ -1.64
USP11P51784 UBE2D3P2-201ENST00000424409 445 ntBASIC4.79□□□□□ -1.64
USP11P51784 AC006946.1-201ENST00000429106 328 ntBASIC4.79□□□□□ -1.64
USP11P51784 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP11P51784 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.79□□□□□ -1.64
USP11P51784 AL139109.1-201ENST00000455491 297 ntBASIC4.79□□□□□ -1.64
USP11P51784 RPL31P60-201ENST00000478450 367 ntBASIC4.79□□□□□ -1.64
USP11P51784 RPS29P19-201ENST00000479709 171 ntBASIC4.79□□□□□ -1.64
USP11P51784 AC069499.1-201ENST00000489433 509 ntBASIC4.79□□□□□ -1.64
USP11P51784 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.79□□□□□ -1.64
USP11P51784 MTND3P25-201ENST00000509243 135 ntBASIC4.79□□□□□ -1.64
USP11P51784 PPBPP1-201ENST00000510807 373 ntBASIC4.79□□□□□ -1.64
USP11P51784 RNU5B-3P-201ENST00000516601 115 ntBASIC4.79□□□□□ -1.64
USP11P51784 AC103783.1-201ENST00000520506 373 ntBASIC4.79□□□□□ -1.64
USP11P51784 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.79□□□□□ -1.64
USP11P51784 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.79□□□□□ -1.64
USP11P51784 AL158827.2-201ENST00000602494 330 ntBASIC4.79□□□□□ -1.64
USP11P51784 ARF4P1-201ENST00000605447 541 ntBASIC4.79□□□□□ -1.64
USP11P51784 MIR15A-201ENST00000607334 83 ntBASIC4.79□□□□□ -1.64
USP11P51784 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.79□□□□□ -1.64
USP11P51784 AL691447.3-201ENST00000635020 330 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms