Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL390240.1-201ENST00000612950 384 ntBASIC4.34□□□□□ -1.71
MRE11P49959 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.34□□□□□ -1.71
MRE11P49959 U73479.1-201ENST00000618062 168 ntBASIC4.34□□□□□ -1.71
MRE11P49959 AC025034.2-201ENST00000623264 286 ntBASIC4.34□□□□□ -1.71
MRE11P49959 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
MRE11P49959 MTND4P14-201ENST00000435799 1354 ntBASIC4.34□□□□□ -1.71
MRE11P49959 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
MRE11P49959 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
MRE11P49959 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
MRE11P49959 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
MRE11P49959 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MRE11P49959 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.33□□□□□ -1.72
MRE11P49959 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
MRE11P49959 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MRE11P49959 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MRE11P49959 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 AC066616.2-201ENST00000559334 1481 ntBASIC4.33□□□□□ -1.72
MRE11P49959 RNU6-61P-201ENST00000365528 109 ntBASIC4.33□□□□□ -1.72
MRE11P49959 RNU6-432P-201ENST00000384196 109 ntBASIC4.33□□□□□ -1.72
MRE11P49959 SNORA24.1-201ENST00000384401 135 ntBASIC4.33□□□□□ -1.72
MRE11P49959 RPL5P18-201ENST00000406671 891 ntBASIC4.33□□□□□ -1.72
MRE11P49959 RNU2-47P-201ENST00000410649 186 ntBASIC4.33□□□□□ -1.72
MRE11P49959 VN1R36P-201ENST00000414936 291 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.33□□□□□ -1.72
MRE11P49959 CKS1BP5-201ENST00000434172 273 ntBASIC4.33□□□□□ -1.72
MRE11P49959 RPL35AP22-201ENST00000436855 335 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 AL590399.6-201ENST00000446396 307 ntBASIC4.33□□□□□ -1.72
MRE11P49959 snoU109.4-201ENST00000458953 143 ntBASIC4.33□□□□□ -1.72
MRE11P49959 Y_RNA.631-201ENST00000459607 101 ntBASIC4.33□□□□□ -1.72
MRE11P49959 ST13P14-201ENST00000474095 734 ntBASIC4.33□□□□□ -1.72
MRE11P49959 Y_RNA.654-201ENST00000497848 106 ntBASIC4.33□□□□□ -1.72
MRE11P49959 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.33□□□□□ -1.72
MRE11P49959 Y_RNA.682-201ENST00000516457 100 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.33□□□□□ -1.72
MRE11P49959 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.33□□□□□ -1.72
MRE11P49959 AC136601.2-201ENST00000604356 474 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AC012443.1-201ENST00000605605 231 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AL355802.3-201ENST00000607571 545 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AC093838.1-201ENST00000613014 469 ntBASIC4.33□□□□□ -1.72
MRE11P49959 AC084781.2-201ENST00000615568 161 ntBASIC4.33□□□□□ -1.72
MRE11P49959 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MRE11P49959 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MRE11P49959 AL513302.2-201ENST00000562313 1842 ntBASIC4.32□□□□□ -1.72
MRE11P49959 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
MRE11P49959 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MRE11P49959 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MRE11P49959 AC121333.1-201ENST00000567488 2709 ntBASIC4.32□□□□□ -1.72
MRE11P49959 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MRE11P49959 RNU1-75P-201ENST00000347264 129 ntBASIC4.32□□□□□ -1.72
MRE11P49959 MIR30E-201ENST00000362104 92 ntBASIC4.32□□□□□ -1.72
MRE11P49959 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
MRE11P49959 RNY4P36-201ENST00000391116 96 ntBASIC4.32□□□□□ -1.72
MRE11P49959 RNU11-4P-201ENST00000391149 133 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AL592114.1-201ENST00000403842 483 ntBASIC4.32□□□□□ -1.72
MRE11P49959 GPM6BP2-201ENST00000432046 144 ntBASIC4.32□□□□□ -1.72
MRE11P49959 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.32□□□□□ -1.72
MRE11P49959 GPM6BP1-201ENST00000446387 144 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC020550.1-201ENST00000447385 163 ntBASIC4.32□□□□□ -1.72
MRE11P49959 HMGN2P21-201ENST00000447764 270 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC010655.1-201ENST00000449336 292 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC115115.1-201ENST00000449927 248 ntBASIC4.32□□□□□ -1.72
MRE11P49959 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.32□□□□□ -1.72
MRE11P49959 AC130509.1-201ENST00000464158 433 ntBASIC4.32□□□□□ -1.72
MRE11P49959 HMGB3P15-201ENST00000507326 574 ntBASIC4.32□□□□□ -1.72
MRE11P49959 RNU6-1088P-201ENST00000516850 104 ntBASIC4.32□□□□□ -1.72
MRE11P49959 RNU6-1092P-201ENST00000516955 87 ntBASIC4.32□□□□□ -1.72
MRE11P49959 DEFB108D-201ENST00000527787 222 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AL137161.1-201ENST00000532231 390 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC008011.1-201ENST00000545989 227 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.32□□□□□ -1.72
MRE11P49959 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.32□□□□□ -1.72
MRE11P49959 BDH2P1-201ENST00000602288 736 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC080078.3-201ENST00000605407 463 ntBASIC4.32□□□□□ -1.72
MRE11P49959 AC040896.1-201ENST00000613819 479 ntBASIC4.32□□□□□ -1.72
MRE11P49959 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MRE11P49959 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MRE11P49959 MTCO1P9-201ENST00000505577 1534 ntBASIC4.31□□□□□ -1.72
MRE11P49959 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
MRE11P49959 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MRE11P49959 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MRE11P49959 SNORA31-201ENST00000362607 130 ntBASIC4.31□□□□□ -1.72
MRE11P49959 RNU6-989P-201ENST00000362756 107 ntBASIC4.31□□□□□ -1.72
MRE11P49959 RNU6-960P-201ENST00000364056 120 ntBASIC4.31□□□□□ -1.72
MRE11P49959 RNU6-637P-201ENST00000384050 107 ntBASIC4.31□□□□□ -1.72
MRE11P49959 Y_RNA.422-201ENST00000384054 114 ntBASIC4.31□□□□□ -1.72
MRE11P49959 RNU6-1160P-201ENST00000384546 104 ntBASIC4.31□□□□□ -1.72
MRE11P49959 Y_RNA.576-201ENST00000384781 102 ntBASIC4.31□□□□□ -1.72
MRE11P49959 RNU6-754P-201ENST00000391166 107 ntBASIC4.31□□□□□ -1.72
MRE11P49959 AL109755.1-201ENST00000401791 649 ntBASIC4.31□□□□□ -1.72
MRE11P49959 MIR548K-201ENST00000408406 116 ntBASIC4.31□□□□□ -1.72
MRE11P49959 MIR548F5-201ENST00000408421 86 ntBASIC4.31□□□□□ -1.72
MRE11P49959 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.31□□□□□ -1.72
MRE11P49959 Z82205.1-201ENST00000428456 297 ntBASIC4.31□□□□□ -1.72
MRE11P49959 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MRE11P49959 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms