Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SOX2P48431 Y_RNA.33-201ENST00000362591 102 ntBASIC3.26□□□□□ -1.89
SOX2P48431 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SOX2P48431 Y_RNA.387-201ENST00000383918 102 ntBASIC3.26□□□□□ -1.89
SOX2P48431 U1.1-201ENST00000384101 164 ntBASIC3.26□□□□□ -1.89
SOX2P48431 PPIAP31-201ENST00000405422 495 ntBASIC3.26□□□□□ -1.89
SOX2P48431 RPL21P65-201ENST00000406094 466 ntBASIC3.26□□□□□ -1.89
SOX2P48431 VN1R36P-201ENST00000414936 291 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AL139396.1-201ENST00000421137 167 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX2P48431 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX2P48431 AC073063.1-201ENST00000434352 607 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC107399.1-201ENST00000451226 265 ntBASIC3.26□□□□□ -1.89
SOX2P48431 FABP5P15-201ENST00000453566 214 ntBASIC3.26□□□□□ -1.89
SOX2P48431 RNU7-170P-201ENST00000459303 61 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AL049830.2-201ENST00000480072 201 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX2P48431 HMGN1P13-201ENST00000505795 138 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX2P48431 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX2P48431 AC008716.1-201ENST00000511084 513 ntBASIC3.26□□□□□ -1.89
SOX2P48431 RPL39P5-202ENST00000512505 151 ntBASIC3.26□□□□□ -1.89
SOX2P48431 RNU6-566P-201ENST00000516790 107 ntBASIC3.26□□□□□ -1.89
SOX2P48431 IGKV2D-19-201ENST00000523346 262 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC008011.1-201ENST00000545989 227 ntBASIC3.26□□□□□ -1.89
SOX2P48431 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX2P48431 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX2P48431 TRAV28-201ENST00000557548 323 ntBASIC3.26□□□□□ -1.89
SOX2P48431 MIR5047-201ENST00000579212 100 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC023575.1-201ENST00000580510 358 ntBASIC3.26□□□□□ -1.89
SOX2P48431 MIR3672-201ENST00000584290 82 ntBASIC3.26□□□□□ -1.89
SOX2P48431 MIR5692C1-201ENST00000585309 91 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX2P48431 AC073539.2-201ENST00000597113 165 ntBASIC3.26□□□□□ -1.89
SOX2P48431 SNORA62.6-201ENST00000606322 83 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.26□□□□□ -1.89
SOX2P48431 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX2P48431 AC135507.2-201ENST00000612443 309 ntBASIC3.26□□□□□ -1.89
SOX2P48431 AL442067.2-201ENST00000614033 363 ntBASIC3.26□□□□□ -1.89
SOX2P48431 SNORD39.4-201ENST00000620099 78 ntBASIC3.26□□□□□ -1.89
SOX2P48431 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX2P48431 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SOX2P48431 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SOX2P48431 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SOX2P48431 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.25□□□□□ -1.89
SOX2P48431 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SOX2P48431 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
SOX2P48431 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.25□□□□□ -1.89
SOX2P48431 RNU6-1197P-201ENST00000391183 107 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AL445189.1-201ENST00000405722 338 ntBASIC3.25□□□□□ -1.89
SOX2P48431 MTHFD2P2-201ENST00000407725 247 ntBASIC3.25□□□□□ -1.89
SOX2P48431 RAB28P1-201ENST00000411517 641 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC074085.1-201ENST00000413598 418 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.25□□□□□ -1.89
SOX2P48431 AL158156.1-201ENST00000422509 473 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC236972.2-201ENST00000434979 310 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.25□□□□□ -1.89
SOX2P48431 MTND4P17-201ENST00000470444 350 ntBASIC3.25□□□□□ -1.89
SOX2P48431 HMGB1P30-201ENST00000492455 606 ntBASIC3.25□□□□□ -1.89
SOX2P48431 CEACAMP10-202ENST00000495431 496 ntBASIC3.25□□□□□ -1.89
SOX2P48431 HMGB3P15-201ENST00000507326 574 ntBASIC3.25□□□□□ -1.89
SOX2P48431 MTND3P25-201ENST00000509243 135 ntBASIC3.25□□□□□ -1.89
SOX2P48431 MRPL49P2-201ENST00000521066 465 ntBASIC3.25□□□□□ -1.89
SOX2P48431 RNU6-323P-201ENST00000521915 107 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.25□□□□□ -1.89
SOX2P48431 AP003122.3-201ENST00000526316 255 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC084851.1-201ENST00000529105 249 ntBASIC3.25□□□□□ -1.89
SOX2P48431 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.25□□□□□ -1.89
SOX2P48431 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.25□□□□□ -1.89
SOX2P48431 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.25□□□□□ -1.89
SOX2P48431 AC120057.2-201ENST00000571520 271 ntBASIC3.25□□□□□ -1.89
SOX2P48431 MIR4790-201ENST00000577799 79 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.25□□□□□ -1.89
SOX2P48431 AC023043.2-201ENST00000589678 1026 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC044792.1-201ENST00000593294 196 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AL050343.2-201ENST00000607338 280 ntBASIC3.25□□□□□ -1.89
SOX2P48431 RNVU1-4-201ENST00000612985 164 ntBASIC3.25□□□□□ -1.89
SOX2P48431 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.25□□□□□ -1.89
SOX2P48431 AL031601.2-202ENST00000622650 282 ntBASIC3.25□□□□□ -1.89
SOX2P48431 MIR6500-201ENST00000622700 86 ntBASIC3.25□□□□□ -1.89
SOX2P48431 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.25□□□□□ -1.89
SOX2P48431 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX2P48431 Y_RNA.212-201ENST00000364177 102 ntBASIC3.24□□□□□ -1.89
SOX2P48431 RNU6-266P-201ENST00000364225 107 ntBASIC3.24□□□□□ -1.89
SOX2P48431 RNU6-1303P-201ENST00000364841 107 ntBASIC3.24□□□□□ -1.89
SOX2P48431 RNU6-128P-201ENST00000383976 107 ntBASIC3.24□□□□□ -1.89
SOX2P48431 Y_RNA.431-201ENST00000384086 102 ntBASIC3.24□□□□□ -1.89
SOX2P48431 RNU6-1179P-201ENST00000384667 107 ntBASIC3.24□□□□□ -1.89
SOX2P48431 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SOX2P48431 RNA5SP424-201ENST00000390988 115 ntBASIC3.24□□□□□ -1.89
SOX2P48431 FAT1P1-201ENST00000406588 507 ntBASIC3.24□□□□□ -1.89
SOX2P48431 MIR548K-201ENST00000408406 116 ntBASIC3.24□□□□□ -1.89
SOX2P48431 MIR548F5-201ENST00000408421 86 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms