Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.44□□□□□ -2.34
HTTP42858 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.44□□□□□ -2.34
HTTP42858 AC097493.1-201ENST00000463958 372 ntBASIC0.44□□□□□ -2.34
HTTP42858 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HTTP42858 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.44□□□□□ -2.34
HTTP42858 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.44□□□□□ -2.34
HTTP42858 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.44□□□□□ -2.34
HTTP42858 CLIC4P2-201ENST00000601934 717 ntBASIC0.44□□□□□ -2.34
HTTP42858 MIR7515-201ENST00000637837 67 ntBASIC0.44□□□□□ -2.34
HTTP42858 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.44□□□□□ -2.34
HTTP42858 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.44□□□□□ -2.34
HTTP42858 RNU1-72P-201ENST00000362976 153 ntBASIC0.44□□□□□ -2.34
HTTP42858 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.44□□□□□ -2.34
HTTP42858 TOMM22P2-201ENST00000430735 237 ntBASIC0.44□□□□□ -2.34
HTTP42858 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.44□□□□□ -2.34
HTTP42858 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
HTTP42858 AC098862.1-201ENST00000504991 413 ntBASIC0.44□□□□□ -2.34
HTTP42858 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.44□□□□□ -2.34
HTTP42858 MIR4287-201ENST00000579398 78 ntBASIC0.44□□□□□ -2.34
HTTP42858 SDAD1P2-201ENST00000441308 2028 ntBASIC0.44□□□□□ -2.34
HTTP42858 SNORA51.2-201ENST00000364595 132 ntBASIC0.44□□□□□ -2.34
HTTP42858 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.44□□□□□ -2.34
HTTP42858 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.44□□□□□ -2.34
HTTP42858 MIR5190-201ENST00000581537 80 ntBASIC0.44□□□□□ -2.34
HTTP42858 AC003001.2-201ENST00000616294 831 ntBASIC0.44□□□□□ -2.34
HTTP42858 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.44□□□□□ -2.34
HTTP42858 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HTTP42858 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
HTTP42858 CD24P4-201ENST00000382840 243 ntBASIC0.43□□□□□ -2.34
HTTP42858 Y_RNA.552-201ENST00000384665 112 ntBASIC0.43□□□□□ -2.34
HTTP42858 MRPL35P3-201ENST00000421557 364 ntBASIC0.43□□□□□ -2.34
HTTP42858 HMGB3P10-201ENST00000434734 572 ntBASIC0.43□□□□□ -2.34
HTTP42858 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.43□□□□□ -2.34
HTTP42858 SNORD124-201ENST00000459577 104 ntBASIC0.43□□□□□ -2.34
HTTP42858 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.43□□□□□ -2.34
HTTP42858 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.43□□□□□ -2.34
HTTP42858 AC103710.4-201ENST00000609301 899 ntBASIC0.43□□□□□ -2.34
HTTP42858 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HTTP42858 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HTTP42858 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
HTTP42858 XKRYP1-201ENST00000423438 492 ntBASIC0.43□□□□□ -2.34
HTTP42858 XKRYP2-201ENST00000432915 492 ntBASIC0.43□□□□□ -2.34
HTTP42858 OSTCP8-201ENST00000445117 448 ntBASIC0.43□□□□□ -2.34
HTTP42858 Y_RNA.644-201ENST00000459006 113 ntBASIC0.43□□□□□ -2.34
HTTP42858 AC010301.1-201ENST00000473936 355 ntBASIC0.43□□□□□ -2.34
HTTP42858 AC008751.2-201ENST00000597885 980 ntBASIC0.43□□□□□ -2.34
HTTP42858 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.43□□□□□ -2.34
HTTP42858 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
HTTP42858 MTCO1P56-201ENST00000401674 224 ntBASIC0.42□□□□□ -2.34
HTTP42858 ELOCP6-201ENST00000429066 328 ntBASIC0.42□□□□□ -2.34
HTTP42858 ELOCP12-201ENST00000458706 328 ntBASIC0.42□□□□□ -2.34
HTTP42858 RPL21P104-201ENST00000464143 478 ntBASIC0.42□□□□□ -2.34
HTTP42858 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.42□□□□□ -2.34
HTTP42858 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.42□□□□□ -2.34
HTTP42858 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.42□□□□□ -2.34
HTTP42858 AP001485.1-201ENST00000604799 199 ntBASIC0.42□□□□□ -2.34
HTTP42858 AL133507.1-201ENST00000605269 557 ntBASIC0.42□□□□□ -2.34
HTTP42858 AC107214.2-201ENST00000608204 634 ntBASIC0.42□□□□□ -2.34
HTTP42858 AC073569.3-201ENST00000619055 682 ntBASIC0.42□□□□□ -2.34
HTTP42858 AC022079.2-201ENST00000619739 566 ntBASIC0.42□□□□□ -2.34
HTTP42858 RNU6-335P-201ENST00000364563 113 ntBASIC0.42□□□□□ -2.34
HTTP42858 SNORA22-201ENST00000383907 134 ntBASIC0.42□□□□□ -2.34
HTTP42858 SNORA22C-201ENST00000384614 134 ntBASIC0.42□□□□□ -2.34
HTTP42858 uc_338.9-201ENST00000617424 182 ntBASIC0.42□□□□□ -2.34
HTTP42858 MIR6076-201ENST00000617521 113 ntBASIC0.42□□□□□ -2.34
HTTP42858 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.42□□□□□ -2.34
HTTP42858 SNORA1.3-201ENST00000384676 136 ntBASIC0.42□□□□□ -2.34
HTTP42858 RN7SKP142-201ENST00000411236 328 ntBASIC0.42□□□□□ -2.34
HTTP42858 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.42□□□□□ -2.34
HTTP42858 PRELID3BP1-201ENST00000457142 540 ntBASIC0.42□□□□□ -2.34
HTTP42858 RPL39P28-201ENST00000465655 155 ntBASIC0.42□□□□□ -2.34
HTTP42858 AC068714.1-201ENST00000559623 800 ntBASIC0.42□□□□□ -2.34
HTTP42858 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.42□□□□□ -2.34
HTTP42858 AL390240.1-201ENST00000612950 384 ntBASIC0.42□□□□□ -2.34
HTTP42858 RNU1-58P-201ENST00000362413 163 ntBASIC0.41□□□□□ -2.34
HTTP42858 RNU6-19P-201ENST00000384718 107 ntBASIC0.41□□□□□ -2.34
HTTP42858 NDUFB4P7-201ENST00000423198 363 ntBASIC0.41□□□□□ -2.34
HTTP42858 CBX3P3-201ENST00000508108 532 ntBASIC0.41□□□□□ -2.34
HTTP42858 AL136363.1-201ENST00000605349 337 ntBASIC0.41□□□□□ -2.34
HTTP42858 AC083865.1-201ENST00000636634 831 ntBASIC0.41□□□□□ -2.34
HTTP42858 AL391516.1-201ENST00000554380 2449 ntBASIC0.41□□□□□ -2.34
HTTP42858 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.41□□□□□ -2.34
HTTP42858 AC010099.3-201ENST00000423896 409 ntBASIC0.41□□□□□ -2.34
HTTP42858 RPL23AP95-201ENST00000426806 265 ntBASIC0.41□□□□□ -2.34
HTTP42858 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.41□□□□□ -2.34
HTTP42858 RPS29P8-201ENST00000445109 171 ntBASIC0.41□□□□□ -2.34
HTTP42858 HMGN2P16-201ENST00000456802 261 ntBASIC0.41□□□□□ -2.34
HTTP42858 SNORA62.5-201ENST00000516634 120 ntBASIC0.41□□□□□ -2.34
HTTP42858 AP005902.1-201ENST00000521358 186 ntBASIC0.41□□□□□ -2.34
HTTP42858 AC007834.2-201ENST00000536310 343 ntBASIC0.41□□□□□ -2.34
HTTP42858 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.41□□□□□ -2.34
HTTP42858 MIR26B-201ENST00000362251 77 ntBASIC0.4□□□□□ -2.34
HTTP42858 OR9R1P-201ENST00000412200 877 ntBASIC0.4□□□□□ -2.34
HTTP42858 AC083875.1-201ENST00000419509 405 ntBASIC0.4□□□□□ -2.34
HTTP42858 AL358794.1-201ENST00000445689 381 ntBASIC0.4□□□□□ -2.34
HTTP42858 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.4□□□□□ -2.34
HTTP42858 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
HTTP42858 AL135752.1-201ENST00000479477 471 ntBASIC0.4□□□□□ -2.34
HTTP42858 AC010627.1-201ENST00000503819 1294 ntBASIC0.4□□□□□ -2.34
HTTP42858 OSBPL9P3-201ENST00000534523 595 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms