Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 BTF3L4P3-201ENST00000418879 476 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 MTCO3P30-201ENST00000426425 670 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.97□□□□□ -1.93
HNF4AP41235 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 RPS15AP34-201ENST00000487776 387 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AC107401.1-201ENST00000503426 685 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.97□□□□□ -1.93
HNF4AP41235 AC091133.4-201ENST00000511142 308 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 Y_RNA.672-201ENST00000516289 104 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 MTCO2P4-201ENST00000517968 247 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.97□□□□□ -1.93
HNF4AP41235 AC107934.1-201ENST00000522215 217 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 COX6CP5-201ENST00000527162 228 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 AL356432.3-201ENST00000568952 465 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 RPL23AP88-201ENST00000605759 454 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 AC091953.2-201ENST00000623979 160 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 PISRT1-201ENST00000626175 531 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 OR5AK4P-201ENST00000635912 903 ntBASIC2.97□□□□□ -1.93
HNF4AP41235 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HNF4AP41235 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.97□□□□□ -1.93
HNF4AP41235 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HNF4AP41235 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
HNF4AP41235 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HNF4AP41235 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HNF4AP41235 RNU4-1-201ENST00000363925 141 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 RNU6-461P-201ENST00000364195 107 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 Y_RNA.333-201ENST00000365274 102 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 SNORA70.4-201ENST00000365509 134 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HNF4AP41235 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AL356057.2-201ENST00000403318 432 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 AL358934.1-201ENST00000432346 324 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 AC016696.1-201ENST00000446949 318 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 RPL23AP41-201ENST00000484754 458 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 RPL9P6-201ENST00000492764 598 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 RN7SKP43-201ENST00000516173 320 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 RPPH1-2P-201ENST00000516688 293 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AP000907.2-201ENST00000530827 353 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HNF4AP41235 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.96□□□□□ -1.94
HNF4AP41235 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.96□□□□□ -1.94
HNF4AP41235 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.96□□□□□ -1.94
HNF4AP41235 AF250324.2-201ENST00000608299 610 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.96□□□□□ -1.94
HNF4AP41235 BX664608.1-201ENST00000610519 487 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AC092794.1-201ENST00000612734 582 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 AC138649.3-201ENST00000622154 254 ntBASIC2.96□□□□□ -1.94
HNF4AP41235 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.96□□□□□ -1.94
HNF4AP41235 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HNF4AP41235 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.95□□□□□ -1.94
HNF4AP41235 RNA5SP374-201ENST00000362939 125 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AL359634.1-202ENST00000404721 284 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 RNU2-49P-201ENST00000410666 184 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 FCF1P9-201ENST00000412546 282 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 NDUFS5P4-201ENST00000412983 318 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.95□□□□□ -1.94
HNF4AP41235 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.95□□□□□ -1.94
HNF4AP41235 ELOCP14-201ENST00000428070 331 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC006946.1-201ENST00000429106 328 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 HMGB1P9-201ENST00000429856 646 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.95□□□□□ -1.94
HNF4AP41235 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 AC104850.1-201ENST00000435940 476 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 ELOCP7-201ENST00000439968 331 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC005094.1-201ENST00000440420 368 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.95□□□□□ -1.94
HNF4AP41235 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 MTND1P1-201ENST00000445453 368 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC079448.1-201ENST00000449377 373 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 RPS29P20-201ENST00000489592 171 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC006445.1-201ENST00000491925 405 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.95□□□□□ -1.94
HNF4AP41235 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
HNF4AP41235 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 RN7SKP258-201ENST00000517151 304 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.95□□□□□ -1.94
HNF4AP41235 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms