Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA13P31271 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA13P31271 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA13P31271 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA13P31271 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA13P31271 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXA13P31271 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
HOXA13P31271 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
HOXA13P31271 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXA13P31271 HSPE1P11-201ENST00000339579 310 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 Y_RNA.245-201ENST00000364493 95 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXA13P31271 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXA13P31271 RNU6-1042P-201ENST00000384204 107 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 RNU6-39P-201ENST00000384344 107 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AL358934.1-201ENST00000432346 324 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AC093899.1-201ENST00000457984 376 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 snoU13.28-201ENST00000459235 104 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 RPL7P5-201ENST00000471472 736 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AC004924.1-201ENST00000480160 781 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXA13P31271 AC107401.1-201ENST00000503426 685 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 SNORA31.1-201ENST00000515993 133 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 SNORA31.5-201ENST00000516190 133 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 RNU6-1282P-201ENST00000516735 96 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 RNU6-1220P-201ENST00000517126 108 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXA13P31271 AC022616.3-201ENST00000523940 148 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AP006587.4-201ENST00000526053 529 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXA13P31271 MIR3167-201ENST00000579623 85 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AC138761.3-201ENST00000579993 334 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXA13P31271 AC245014.2-201ENST00000603689 287 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 AC246785.4-201ENST00000605374 287 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXA13P31271 AC007619.2-201ENST00000605743 379 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXA13P31271 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXA13P31271 MTND1P37-201ENST00000636562 264 ntBASIC3.23□□□□□ -1.89
HOXA13P31271 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXA13P31271 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA13P31271 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXA13P31271 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA13P31271 UBE2L2-201ENST00000254302 429 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA13P31271 AC073343.1-201ENST00000328239 651 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 RNU1-112P-201ENST00000364401 164 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 RNU6-512P-201ENST00000364438 103 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXA13P31271 RPL21P3-201ENST00000395517 478 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 RNU2-33P-201ENST00000410344 192 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC093392.2-201ENST00000450682 337 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AC108938.1-201ENST00000451204 136 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC146507.2-201ENST00000460608 476 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AL135752.1-201ENST00000479477 471 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 MTND4LP22-201ENST00000508209 276 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXA13P31271 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 SNORD59.2-201ENST00000516873 68 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AP000889.1-201ENST00000530968 660 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 HMGB1P6-201ENST00000569046 646 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 MIR4319-201ENST00000577285 85 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXA13P31271 AP003465.2-201ENST00000602571 373 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AL022154.1-201ENST00000604698 785 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AL136363.1-201ENST00000605349 337 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 AC109347.2-201ENST00000610220 349 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 OR5AK4P-201ENST00000635912 903 ntBASIC3.22□□□□□ -1.89
HOXA13P31271 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HOXA13P31271 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA13P31271 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA13P31271 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
HOXA13P31271 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXA13P31271 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXA13P31271 RNU6-1167P-201ENST00000363227 94 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 Y_RNA.582-201ENST00000391023 95 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXA13P31271 ZNF863P-201ENST00000426746 417 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC079448.1-201ENST00000449377 373 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 RNU6-953P-201ENST00000459154 107 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 RPL9P6-201ENST00000492764 598 ntBASIC3.21□□□□□ -1.9
HOXA13P31271 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms