Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 SNRPFP4-201ENST00000456366 242 ntBASIC2.42□□□□□ -2.02
SDC1P18827 RPL26P9-201ENST00000457466 433 ntBASIC2.42□□□□□ -2.02
SDC1P18827 MTCO2P29-201ENST00000465212 189 ntBASIC2.42□□□□□ -2.02
SDC1P18827 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.42□□□□□ -2.02
SDC1P18827 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.42□□□□□ -2.02
SDC1P18827 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC1P18827 RNU2-46P-201ENST00000517038 113 ntBASIC2.42□□□□□ -2.02
SDC1P18827 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.42□□□□□ -2.02
SDC1P18827 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC1P18827 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
SDC1P18827 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.42□□□□□ -2.02
SDC1P18827 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.42□□□□□ -2.02
SDC1P18827 AC008739.2-201ENST00000597006 317 ntBASIC2.42□□□□□ -2.02
SDC1P18827 Z99497.2-201ENST00000603634 310 ntBASIC2.42□□□□□ -2.02
SDC1P18827 AP000787.2-201ENST00000604432 568 ntBASIC2.42□□□□□ -2.02
SDC1P18827 AC019159.1-201ENST00000605094 187 ntBASIC2.42□□□□□ -2.02
SDC1P18827 ATP1B3P1-201ENST00000605365 821 ntBASIC2.42□□□□□ -2.02
SDC1P18827 AC107294.1-201ENST00000609524 467 ntBASIC2.42□□□□□ -2.02
SDC1P18827 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.42□□□□□ -2.02
SDC1P18827 AP003399.1-201ENST00000637534 361 ntBASIC2.42□□□□□ -2.02
SDC1P18827 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SDC1P18827 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SDC1P18827 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SDC1P18827 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SDC1P18827 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.42□□□□□ -2.02
SDC1P18827 AL359693.1-201ENST00000614959 2407 ntBASIC2.41□□□□□ -2.02
SDC1P18827 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SDC1P18827 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 FGF7P2-201ENST00000332473 296 ntBASIC2.41□□□□□ -2.02
SDC1P18827 HSPE1P11-201ENST00000339579 310 ntBASIC2.41□□□□□ -2.02
SDC1P18827 MIR6073-201ENST00000352083 89 ntBASIC2.41□□□□□ -2.02
SDC1P18827 SNORD56.2-201ENST00000363242 71 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RNU6-778P-201ENST00000363269 103 ntBASIC2.41□□□□□ -2.02
SDC1P18827 U8.3-201ENST00000363321 132 ntBASIC2.41□□□□□ -2.02
SDC1P18827 SNORA70.4-201ENST00000365509 134 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RNU6-39P-201ENST00000384344 107 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RNY3P10-201ENST00000384764 102 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RPL23AP32-201ENST00000395315 459 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 AL162578.1-201ENST00000406202 378 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RNU2-68P-201ENST00000410878 191 ntBASIC2.41□□□□□ -2.02
SDC1P18827 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 RPL36AP53-201ENST00000432891 316 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.41□□□□□ -2.02
SDC1P18827 RPS12P2-201ENST00000439728 269 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 RPS3AP12-201ENST00000443616 753 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.41□□□□□ -2.02
SDC1P18827 AC027673.1-201ENST00000456245 405 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RPL37P6-201ENST00000460682 294 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RPS27AP10-201ENST00000496103 208 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 AC009901.1-201ENST00000506703 541 ntBASIC2.41□□□□□ -2.02
SDC1P18827 NDUFB4P2-201ENST00000509515 391 ntBASIC2.41□□□□□ -2.02
SDC1P18827 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.41□□□□□ -2.02
SDC1P18827 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.41□□□□□ -2.02
SDC1P18827 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.41□□□□□ -2.02
SDC1P18827 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
SDC1P18827 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.41□□□□□ -2.02
SDC1P18827 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 AC020895.1-201ENST00000595362 272 ntBASIC2.41□□□□□ -2.02
SDC1P18827 RPL23AP78-201ENST00000599928 470 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AC068276.1-201ENST00000605793 379 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AC008498.1-201ENST00000613012 531 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AC025594.3-201ENST00000613068 790 ntBASIC2.41□□□□□ -2.02
SDC1P18827 AC008250.2-201ENST00000615261 205 ntBASIC2.41□□□□□ -2.02
SDC1P18827 FRG1KP-201ENST00000623592 341 ntBASIC2.41□□□□□ -2.02
SDC1P18827 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.41□□□□□ -2.02
SDC1P18827 MTND5P42-201ENST00000637720 498 ntBASIC2.41□□□□□ -2.02
SDC1P18827 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
SDC1P18827 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SDC1P18827 AL137003.2-201ENST00000606924 2538 ntBASIC2.4□□□□□ -2.02
SDC1P18827 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SDC1P18827 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
SDC1P18827 OR5J1P-201ENST00000313544 939 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SDC1P18827 RNU6-960P-201ENST00000364056 120 ntBASIC2.4□□□□□ -2.03
SDC1P18827 RNA5SP387-201ENST00000364226 106 ntBASIC2.4□□□□□ -2.03
SDC1P18827 RNU6-297P-201ENST00000384636 107 ntBASIC2.4□□□□□ -2.03
SDC1P18827 MIR767-201ENST00000390228 109 ntBASIC2.4□□□□□ -2.03
SDC1P18827 SNORA40.3-201ENST00000390964 122 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC023141.4-201ENST00000412031 328 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AC092809.3-201ENST00000415453 231 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC1P18827 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.4□□□□□ -2.03
SDC1P18827 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC1P18827 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.4□□□□□ -2.03
SDC1P18827 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC1P18827 AC006946.1-201ENST00000429106 328 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AL592045.1-201ENST00000429867 352 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.4□□□□□ -2.03
SDC1P18827 AC104850.1-201ENST00000435940 476 ntBASIC2.4□□□□□ -2.03
SDC1P18827 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.4□□□□□ -2.03
SDC1P18827 USP9YP15-201ENST00000442391 422 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms