Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL034408.1-202ENST00000636088 415 ntBASIC4.64□□□□□ -1.67
VAMP4O75379 AL732372.2-225ENST00000642124 456 ntBASIC4.64□□□□□ -1.67
VAMP4O75379 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP4O75379 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP4O75379 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VAMP4O75379 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.63□□□□□ -1.67
VAMP4O75379 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP4O75379 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
VAMP4O75379 RNU6-283P-201ENST00000364788 107 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP4O75379 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VAMP4O75379 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAMP4O75379 SNORA22B-201ENST00000383876 138 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 RNU6-14P-201ENST00000384630 106 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AL391417.1-201ENST00000404100 426 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.63□□□□□ -1.67
VAMP4O75379 PMCHL1-202ENST00000423102 261 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AC091286.1-201ENST00000431233 461 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AL137792.2-201ENST00000443484 235 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AP000873.1-201ENST00000463987 400 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AC084357.1-201ENST00000473404 255 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AP002812.1-201ENST00000495378 474 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AC008526.1-201ENST00000509149 338 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 SNORA14.1-201ENST00000516113 141 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 RNU6-390P-201ENST00000516259 103 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.63□□□□□ -1.67
VAMP4O75379 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.63□□□□□ -1.67
VAMP4O75379 AC107016.1-201ENST00000550463 337 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 OR4H12P-201ENST00000556269 907 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.63□□□□□ -1.67
VAMP4O75379 AC067852.3-201ENST00000589177 561 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.63□□□□□ -1.67
VAMP4O75379 AC006077.1-201ENST00000604746 343 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 ZNF519P1-201ENST00000449011 1626 ntBASIC4.63□□□□□ -1.67
VAMP4O75379 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.62□□□□□ -1.67
VAMP4O75379 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP4O75379 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VAMP4O75379 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP4O75379 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP4O75379 Y_RNA.112-201ENST00000363250 102 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 RNU6-639P-201ENST00000384074 107 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.62□□□□□ -1.67
VAMP4O75379 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.62□□□□□ -1.67
VAMP4O75379 CYCSP4-201ENST00000429682 331 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 CKS1BP5-201ENST00000434172 273 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 NEFMP1-201ENST00000443423 1006 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP4O75379 HMGN1P11-201ENST00000508668 303 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 SMURF2P1-201ENST00000514992 481 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 RNU2-69P-201ENST00000516061 100 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 Y_RNA.689-201ENST00000516589 107 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 RNU6-579P-201ENST00000516879 102 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP4O75379 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP4O75379 AC008737.2-201ENST00000599446 118 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.62□□□□□ -1.67
VAMP4O75379 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.62□□□□□ -1.67
VAMP4O75379 AC136443.5-201ENST00000603741 370 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 AL157817.1-201ENST00000614264 790 ntBASIC4.62□□□□□ -1.67
VAMP4O75379 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VAMP4O75379 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VAMP4O75379 FAM35DP-201ENST00000323387 2712 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AC006504.1-201ENST00000562493 3666 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAMP4O75379 Y_RNA.28-201ENST00000362554 111 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RNU6-128P-201ENST00000383976 107 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RNU6-1304P-201ENST00000411374 106 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RNA5SP111-201ENST00000411386 101 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 RPLP0P7-201ENST00000416050 667 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AL669831.1-202ENST00000428504 417 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 MTND3P2-201ENST00000438452 342 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 MRPS31P2-201ENST00000451581 518 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 AC106872.2-201ENST00000494303 480 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.61□□□□□ -1.67
VAMP4O75379 AC104136.1-201ENST00000512969 394 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RN7SKP18-201ENST00000516005 275 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 SNORA31.3-201ENST00000516029 96 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RNU6-677P-201ENST00000516914 101 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RN7SKP60-201ENST00000516985 239 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RN7SKP258-201ENST00000517151 304 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 RNU4-60P-201ENST00000517239 135 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 AP006245.1-201ENST00000522549 120 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 AC126177.3-201ENST00000551839 688 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.61□□□□□ -1.67
VAMP4O75379 MIR5692C1-201ENST00000585309 91 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.61□□□□□ -1.67
VAMP4O75379 XIAPP1-201ENST00000603162 600 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AL158032.1-201ENST00000605401 106 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 SNORA51-201ENST00000606420 132 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 FAM157A-202ENST00000615155 405 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 AC133104.2-201ENST00000615272 193 ntBASIC4.61□□□□□ -1.67
VAMP4O75379 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VAMP4O75379 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.61□□□□□ -1.67
VAMP4O75379 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms