Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL031176.1-201ENST00000604554 466 ntBASIC0.81□□□□□ -2.28
SSSCA1O60232 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.81□□□□□ -2.28
SSSCA1O60232 AL359854.1-201ENST00000614203 1594 ntBASIC0.81□□□□□ -2.28
SSSCA1O60232 OR4G11P-202ENST00000642116 1414 ntBASIC0.81□□□□□ -2.28
SSSCA1O60232 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SSSCA1O60232 SNORA7.1-201ENST00000363750 139 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 RNU6-673P-201ENST00000365084 104 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 SNORA25B-201ENST00000365507 128 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 MIR518D-201ENST00000385014 87 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 MIR1283-2-201ENST00000408621 87 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SSSCA1O60232 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.8□□□□□ -2.28
SSSCA1O60232 RPL21P90-201ENST00000415692 466 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 BPY2DP-201ENST00000422208 265 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 AL022238.1-201ENST00000442557 355 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 RPL32P28-201ENST00000443577 397 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.8□□□□□ -2.28
SSSCA1O60232 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.8□□□□□ -2.28
SSSCA1O60232 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SSSCA1O60232 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.8□□□□□ -2.28
SSSCA1O60232 AC117532.1-201ENST00000514638 323 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 SMURF2P1-201ENST00000514992 481 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.8□□□□□ -2.28
SSSCA1O60232 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.8□□□□□ -2.28
SSSCA1O60232 HSPA8P13-201ENST00000523715 472 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.8□□□□□ -2.28
SSSCA1O60232 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.8□□□□□ -2.28
SSSCA1O60232 AC026271.5-201ENST00000577873 130 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 AC021646.1-201ENST00000605469 484 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 FTX_3.1-201ENST00000610451 147 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.8□□□□□ -2.28
SSSCA1O60232 MIR5739-201ENST00000619803 80 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 AL353770.2-201ENST00000620024 78 ntBASIC0.8□□□□□ -2.28
SSSCA1O60232 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SSSCA1O60232 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
SSSCA1O60232 RNU6-457P-201ENST00000363999 107 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 RNA5SP240-201ENST00000365355 128 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 RNU6-76P-201ENST00000384060 104 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 RNU6-140P-201ENST00000384566 108 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 MIR888-201ENST00000401186 77 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SSSCA1O60232 RNU2-15P-201ENST00000410692 191 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 BEND7P1-201ENST00000422058 457 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AC018630.2-202ENST00000422992 927 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AC092634.2-201ENST00000428146 1010 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.79□□□□□ -2.28
SSSCA1O60232 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.79□□□□□ -2.28
SSSCA1O60232 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.79□□□□□ -2.28
SSSCA1O60232 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.79□□□□□ -2.28
SSSCA1O60232 AC135279.1-201ENST00000543493 504 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.79□□□□□ -2.28
SSSCA1O60232 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.79□□□□□ -2.28
SSSCA1O60232 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.79□□□□□ -2.28
SSSCA1O60232 SNORD39.3-201ENST00000584451 71 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AC138473.1-201ENST00000605717 526 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AL157834.3-201ENST00000615543 103 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 STMN1P1-201ENST00000617809 440 ntBASIC0.79□□□□□ -2.28
SSSCA1O60232 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
SSSCA1O60232 MTND5P9-201ENST00000503854 1755 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SSSCA1O60232 SNORD115-3-201ENST00000363100 82 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 Y_RNA.111-201ENST00000363248 100 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 RNU4-38P-201ENST00000364472 129 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.78□□□□□ -2.28
SSSCA1O60232 RNU6-741P-201ENST00000383889 107 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 U8.10-201ENST00000384260 133 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 RNU1-78P-201ENST00000391248 165 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 PIGPP2-201ENST00000411569 458 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 RPL37P10-201ENST00000412884 288 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AC233981.1-201ENST00000423224 461 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 USP9YP24-201ENST00000434374 697 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.78□□□□□ -2.28
SSSCA1O60232 RPL39P29-201ENST00000447779 157 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 MTND2P24-201ENST00000453434 806 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AC244505.3-201ENST00000454598 187 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 RNU6-775P-201ENST00000459318 96 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.78□□□□□ -2.28
SSSCA1O60232 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.78□□□□□ -2.28
SSSCA1O60232 ZNF705CP-201ENST00000530515 889 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AP000873.5-201ENST00000533906 236 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AL359212.1-201ENST00000556608 614 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.78□□□□□ -2.28
SSSCA1O60232 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.78□□□□□ -2.28
SSSCA1O60232 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.78□□□□□ -2.28
SSSCA1O60232 AC099842.1-201ENST00000619919 596 ntBASIC0.78□□□□□ -2.28
SSSCA1O60232 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SSSCA1O60232 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.78□□□□□ -2.29
SSSCA1O60232 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.78□□□□□ -2.29
SSSCA1O60232 LUZP4P1-201ENST00000415420 344 ntBASIC0.77□□□□□ -2.29
SSSCA1O60232 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.77□□□□□ -2.29
SSSCA1O60232 UBE2V1P4-201ENST00000425374 344 ntBASIC0.77□□□□□ -2.29
SSSCA1O60232 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.77□□□□□ -2.29
SSSCA1O60232 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.77□□□□□ -2.29
SSSCA1O60232 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.77□□□□□ -2.29
SSSCA1O60232 HMGN2P18-201ENST00000450680 270 ntBASIC0.77□□□□□ -2.29
SSSCA1O60232 AL137159.1-201ENST00000452808 512 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms