Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU6-1056P-201ENST00000383996 107 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 SNORA70.10-201ENST00000384515 134 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 RNA5SP296-201ENST00000410523 111 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 OR2AH1P-201ENST00000425717 928 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 AC124916.1-201ENST00000444020 547 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 AL354714.3-201ENST00000447284 493 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 AL389915.2-201ENST00000454576 441 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.61□□□□□ -1.51
ACTN4O43707 BX284632.1-201ENST00000478218 541 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ACTN4O43707 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.61□□□□□ -1.51
ACTN4O43707 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.61□□□□□ -1.51
ACTN4O43707 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.61□□□□□ -1.51
ACTN4O43707 AC027308.1-201ENST00000517993 110 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.61□□□□□ -1.51
ACTN4O43707 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.61□□□□□ -1.51
ACTN4O43707 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ACTN4O43707 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.61□□□□□ -1.51
ACTN4O43707 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.61□□□□□ -1.51
ACTN4O43707 AL591926.8-201ENST00000616876 211 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.61□□□□□ -1.51
ACTN4O43707 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ACTN4O43707 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
ACTN4O43707 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ACTN4O43707 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ACTN4O43707 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.6□□□□□ -1.51
ACTN4O43707 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ACTN4O43707 RNU6-898P-201ENST00000365627 104 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ACTN4O43707 AC005522.1-201ENST00000395416 346 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 RAB9AP3-201ENST00000412737 573 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.6□□□□□ -1.51
ACTN4O43707 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.6□□□□□ -1.51
ACTN4O43707 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.6□□□□□ -1.51
ACTN4O43707 RAB9AP1-201ENST00000449393 573 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 AC097484.1-201ENST00000471148 389 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 HSPE1P6-201ENST00000479457 291 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 RPL23AP49-201ENST00000492925 468 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 CYCTP-201ENST00000504253 315 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 ATP5LP3-201ENST00000514223 304 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.6□□□□□ -1.51
ACTN4O43707 RNU4-57P-201ENST00000515980 135 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 AC008694.2-201ENST00000517591 306 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 AC022968.1-201ENST00000567372 442 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 MIR5695-201ENST00000579717 85 ntBASIC5.6□□□□□ -1.51
ACTN4O43707 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.6□□□□□ -1.51
ACTN4O43707 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.6□□□□□ -1.51
ACTN4O43707 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.6□□□□□ -1.51
ACTN4O43707 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ACTN4O43707 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.6□□□□□ -1.51
ACTN4O43707 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ACTN4O43707 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ACTN4O43707 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ACTN4O43707 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ACTN4O43707 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.59□□□□□ -1.51
ACTN4O43707 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.59□□□□□ -1.51
ACTN4O43707 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.59□□□□□ -1.51
ACTN4O43707 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ACTN4O43707 STX3-208ENST00000641815 3236 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.59□□□□□ -1.51
ACTN4O43707 FTLP6-201ENST00000355274 422 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 SNORA73.1-201ENST00000363107 205 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 RNU4-17P-201ENST00000365598 141 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ACTN4O43707 AL391361.1-201ENST00000405580 489 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.59□□□□□ -1.51
ACTN4O43707 AC005154.2-201ENST00000438110 379 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AC005042.3-201ENST00000453230 174 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AC079168.2-201ENST00000453977 416 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 RN7SL222P-201ENST00000476452 299 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AC072052.1-201ENST00000496556 306 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AC010265.1-201ENST00000513509 211 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AL391261.3-201ENST00000557194 520 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.59□□□□□ -1.51
ACTN4O43707 AC011445.2-201ENST00000599274 173 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.59□□□□□ -1.51
ACTN4O43707 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.59□□□□□ -1.51
ACTN4O43707 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ACTN4O43707 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ACTN4O43707 AC092593.1-201ENST00000515413 1815 ntBASIC5.59□□□□□ -1.51
ACTN4O43707 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ACTN4O43707 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ACTN4O43707 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
ACTN4O43707 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
ACTN4O43707 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ACTN4O43707 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
ACTN4O43707 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ACTN4O43707 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.58□□□□□ -1.52
ACTN4O43707 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 AC008568.2-201ENST00000623862 2313 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
ACTN4O43707 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 SNURFL-201ENST00000309296 343 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 RNU6-249P-201ENST00000363016 102 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms