Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC188H7C350 AP002360.4-201ENST00000606980 481 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 AP001506.1-201ENST00000615444 211 ntBASIC2.88□□□□□ -1.95
CCDC188H7C350 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC188H7C350 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC188H7C350 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CCDC188H7C350 ELL2P3-201ENST00000457883 1602 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 RNU6-960P-201ENST00000364056 120 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 RNU6-39P-201ENST00000384344 107 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC188H7C350 RNA5SP120-201ENST00000410900 112 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 RNU6-195P-201ENST00000411352 109 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 USP9YP6-201ENST00000413550 854 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC080125.1-201ENST00000414888 684 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC092809.3-201ENST00000415453 231 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC098614.2-201ENST00000426040 255 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC104850.1-201ENST00000435940 476 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC073614.1-201ENST00000438690 650 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC188H7C350 RNA5SP269-201ENST00000459032 137 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC090525.1-201ENST00000479116 478 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC007182.2-201ENST00000489251 402 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC083906.5-201ENST00000503722 328 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 SEM1P1-201ENST00000506694 209 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 RNU2-46P-201ENST00000517038 113 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC024619.4-201ENST00000580924 316 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC188H7C350 ELF2P3-201ENST00000445099 1506 ntBASIC2.87□□□□□ -1.95
CCDC188H7C350 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC188H7C350 AC110491.1-201ENST00000562191 2010 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC188H7C350 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC188H7C350 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC188H7C350 RNU4-1-201ENST00000363925 141 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CCDC188H7C350 RNU6-14P-201ENST00000384630 106 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AL122016.1-201ENST00000403365 367 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 RNU2-39P-201ENST00000410604 198 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC188H7C350 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC009518.2-201ENST00000418056 731 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC188H7C350 AC104332.2-201ENST00000429959 156 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC188H7C350 Z96811.1-201ENST00000445880 108 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AL136380.1-201ENST00000447970 162 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC188H7C350 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC188H7C350 AC117522.1-201ENST00000509821 380 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 SCGB1D5P-201ENST00000515134 247 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 Y_RNA.689-201ENST00000516589 107 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 SNORA18.6-201ENST00000516792 115 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.86□□□□□ -1.95
CCDC188H7C350 AC009812.2-201ENST00000517657 457 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC188H7C350 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC188H7C350 AC010546.1-201ENST00000569391 485 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC188H7C350 PISRT1-201ENST00000626175 531 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC188H7C350 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC188H7C350 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC188H7C350 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC188H7C350 AC000403.1-201ENST00000613696 3585 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 ZNF519P1-201ENST00000449011 1626 ntBASIC2.86□□□□□ -1.95
CCDC188H7C350 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC188H7C350 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC188H7C350 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CCDC188H7C350 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC188H7C350 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC188H7C350 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC188H7C350 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC188H7C350 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC188H7C350 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC188H7C350 RNU4-91P-201ENST00000364778 135 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AC023141.4-201ENST00000412031 328 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC188H7C350 AC007560.1-201ENST00000426912 237 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AC009961.3-201ENST00000449832 765 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC188H7C350 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC188H7C350 RN7SL807P-201ENST00000470923 297 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 RPL31P41-201ENST00000477967 372 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC188H7C350 AC108078.2-201ENST00000510750 236 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 TBCAP3-201ENST00000512475 312 ntBASIC2.85□□□□□ -1.95
CCDC188H7C350 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms