Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNU6-1249P-201ENST00000363237 111 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 U8.14-201ENST00000390843 143 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 SSXP10-201ENST00000402595 565 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 BUD31P2-201ENST00000449374 300 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC025165.5-201ENST00000602802 578 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AL450336.1-201ENST00000605180 586 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 SDAD1P2-201ENST00000441308 2028 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 RNA5SP56-201ENST00000410277 118 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 RNA5SP193-201ENST00000410353 107 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 USP9YP33-201ENST00000412220 421 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC244035.1-201ENST00000430042 390 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 ZNF965P-201ENST00000432501 817 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 USP9YP35-201ENST00000435696 412 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 RNU6-1308P-201ENST00000516817 103 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC078899.2-201ENST00000595282 212 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AC004852.3-201ENST00000614131 326 ntBASIC1.31□□□□□ -2.2
SHANK2Q9UPX8 AL513185.3-201ENST00000433335 1300 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 RNA5SP258-201ENST00000362750 119 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 MIR1197-201ENST00000408818 88 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 AC004022.1-201ENST00000447766 1066 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 EIF4EP5-201ENST00000528228 640 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 AL512605.2-201ENST00000592972 256 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 AC005021.1-201ENST00000608730 355 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 AP003072.5-201ENST00000623872 773 ntBASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SHANK2Q9UPX8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 XKRYP1-201ENST00000423438 492 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 RPL27AP8-201ENST00000424277 446 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 XKRYP2-201ENST00000432915 492 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 AL022238.1-201ENST00000442557 355 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 OSTCP8-201ENST00000445117 448 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 AL359385.1-201ENST00000456509 365 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 COL6A4P2-205ENST00000509855 506 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 PRELID3BP4-201ENST00000515476 571 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 CYCSP23-201ENST00000519781 313 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 AP005902.1-201ENST00000521358 186 ntBASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.29□□□□□ -2.2
SHANK2Q9UPX8 AL356473.1-201ENST00000406203 1408 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 RNU4-31P-201ENST00000384211 141 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 RPS15AP38-201ENST00000413110 372 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC244453.4-201ENST00000419150 388 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC244636.1-201ENST00000421152 228 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC246680.2-201ENST00000422106 389 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 USP12PX-201ENST00000432383 1057 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC098862.1-201ENST00000504991 413 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 TPT1P8-201ENST00000510120 555 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 RNU7-193P-201ENST00000516723 65 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 POLR2KP1-201ENST00000553226 168 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 MIR7515-201ENST00000637837 67 ntBASIC1.28□□□□□ -2.2
SHANK2Q9UPX8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SHANK2Q9UPX8 AL356432.1-201ENST00000405809 419 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 RNU2-41P-201ENST00000410991 178 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 snoU13.28-201ENST00000459235 104 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 AC055731.1-201ENST00000474387 401 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 AC111000.5-201ENST00000506559 1178 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 AC084033.1-201ENST00000550830 633 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 MIR5571-201ENST00000577998 113 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 AC021749.1-201ENST00000604322 607 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 AC090517.3-201ENST00000625170 141 ntBASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SHANK2Q9UPX8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SHANK2Q9UPX8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SHANK2Q9UPX8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms