Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RMST_4.1-201ENST00000616886 107 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AP001642.1-201ENST00000624727 2117 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.16-201ENST00000362421 102 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-545P-201ENST00000362681 104 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 U3.13-201ENST00000364804 214 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-662P-201ENST00000384253 104 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 MIR301A-201ENST00000385261 86 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 PTMAP2-201ENST00000397627 327 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 MTCO3P29-201ENST00000432119 779 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 BTF3P6-201ENST00000448054 499 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 NDUFB4P10-201ENST00000452541 359 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AL645939.1-201ENST00000453429 797 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AL132838.2-201ENST00000492041 314 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AC073073.1-201ENST00000493920 463 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 APOOP4-201ENST00000513530 597 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 RNA5SP471-201ENST00000516971 106 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 RNU1-45P-201ENST00000517191 141 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 TRAV37-201ENST00000553906 342 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 MIR5696-201ENST00000578474 85 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 MIR4300-201ENST00000581016 96 ntBASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
ZC3H4Q9UPT8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 FAM91A3P-201ENST00000456826 2544 ntBASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZC3H4Q9UPT8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC007685.1-201ENST00000329806 452 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.83-201ENST00000363005 113 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 RNY1-201ENST00000364228 113 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 TMSB10P2-201ENST00000416049 131 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 MTND3P9-201ENST00000429526 346 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC010469.2-201ENST00000496412 480 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC002545.1-201ENST00000592511 181 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 AC006971.1-201ENST00000407916 4486 ntBASIC5.65□□□□□ -1.51
ZC3H4Q9UPT8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC009643.2-201ENST00000603543 1448 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC021146.4-201ENST00000309229 279 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 MIR383-201ENST00000362257 73 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 SNORA71.3-201ENST00000362582 128 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.33-201ENST00000362591 102 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 SNORD81.1-201ENST00000363064 77 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.358-201ENST00000365491 99 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 RNU6-395P-201ENST00000365662 106 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 CYCSP19-201ENST00000411715 316 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AL096701.2-201ENST00000416920 238 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 TOMM20P4-201ENST00000427861 435 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC020890.1-201ENST00000491837 504 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 SCARNA13-201ENST00000516672 275 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.703-201ENST00000516846 111 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AL590705.4-201ENST00000532209 134 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 SYF2P1-201ENST00000550658 413 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms