Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 AC136777.2-201ENST00000522979 358 ntBASIC9.12□□□□□ -0.95
SENP3Q9H4L4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SENP3Q9H4L4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 RNU6-614P-201ENST00000384369 107 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 CRYGGP-201ENST00000443337 145 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 AC023818.1-201ENST00000498379 384 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 RNU6-917P-201ENST00000516294 104 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 MIR4778-201ENST00000577635 80 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 HNRNPDLP4-201ENST00000605144 301 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 U6.59-201ENST00000615686 107 ntBASIC9.11□□□□□ -0.95
SENP3Q9H4L4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SENP3Q9H4L4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 RN7SKP280-201ENST00000364196 304 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 SNORA68.2-201ENST00000391263 128 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 RNA5SP34-201ENST00000516887 130 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 ACA59.2-201ENST00000517061 156 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 SNORA31.20-201ENST00000517111 133 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 MIR3691-201ENST00000578066 90 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 MIR3117-201ENST00000584034 78 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.1□□□□□ -0.95
SENP3Q9H4L4 AC007993.1-201ENST00000621298 2430 ntBASIC9.1□□□□□ -0.95
SENP3Q9H4L4 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 SNORA1.1-201ENST00000364671 133 ntBASIC9.09□□□□□ -0.95
SENP3Q9H4L4 RPS12P2-201ENST00000439728 269 ntBASIC9.09□□□□□ -0.95
SENP3Q9H4L4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 SNORA74.4-201ENST00000607595 199 ntBASIC9.09□□□□□ -0.95
SENP3Q9H4L4 RNA5SP440-201ENST00000612665 119 ntBASIC9.09□□□□□ -0.95
SENP3Q9H4L4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SENP3Q9H4L4 MROH3P-201ENST00000435735 2676 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 RNU1-134P-201ENST00000362935 165 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 MIR3065-201ENST00000390137 79 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 SNORA11-201ENST00000408789 128 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 RN7SKP271-201ENST00000410528 320 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 U3.43-201ENST00000410734 213 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 AC244452.1-201ENST00000413798 141 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 AL450471.1-201ENST00000447509 127 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 MIR1269B-201ENST00000580405 75 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 LINC02035-201ENST00000610128 5476 ntBASIC9.08□□□□□ -0.96
SENP3Q9H4L4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
SENP3Q9H4L4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
SENP3Q9H4L4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.07□□□□□ -0.96
SENP3Q9H4L4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
SENP3Q9H4L4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.07□□□□□ -0.96
SENP3Q9H4L4 AP003119.3-201ENST00000566747 4192 ntBASIC9.07□□□□□ -0.96
SENP3Q9H4L4 AC004925.1-201ENST00000624256 2706 ntBASIC9.07□□□□□ -0.96
SENP3Q9H4L4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SENP3Q9H4L4 RNU1-108P-201ENST00000362556 161 ntBASIC9.07□□□□□ -0.96
SENP3Q9H4L4 AL512326.2-201ENST00000426359 151 ntBASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms