Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIR6875-201ENST00000617506 72 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AL049641.1-201ENST00000441055 1948 ntBASIC4.4□□□□□ -1.7
CCDC113Q9H0I3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC113Q9H0I3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.4□□□□□ -1.7
CCDC113Q9H0I3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC113Q9H0I3 RNU6-562P-201ENST00000362731 107 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.212-201ENST00000364177 102 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 RNU6-140P-201ENST00000384566 108 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 U3.42-201ENST00000408746 214 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 RNU6-628P-201ENST00000410675 107 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 RNU6-607P-201ENST00000411283 108 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AL353621.1-201ENST00000418219 243 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 TOMM20P4-201ENST00000427861 435 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC087884.1-201ENST00000469738 328 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 RPS27P27-201ENST00000498779 255 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC146944.2-203ENST00000502493 354 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC139495.1-202ENST00000513164 354 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 RNU6-559P-201ENST00000516151 98 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 TRAV37-201ENST00000553906 342 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC106785.1-201ENST00000565935 262 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AL138726.1-201ENST00000614873 333 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC103858.2-201ENST00000621471 543 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 MIR6500-201ENST00000622700 86 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC099506.2-201ENST00000623074 221 ntBASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC113Q9H0I3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AL359693.1-201ENST00000614959 2407 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 MIR412-201ENST00000362142 91 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 RNA5SP399-201ENST00000364003 117 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 MIR548K-201ENST00000408406 116 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 SNRPEP9-201ENST00000436794 238 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.632-201ENST00000459189 102 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC008526.1-201ENST00000509149 338 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 MIR892C-201ENST00000516410 77 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC025755.1-201ENST00000521306 278 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 COPS8P3-201ENST00000526024 482 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC091516.1-201ENST00000549191 703 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC025423.5-201ENST00000550230 219 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC026371.1-201ENST00000551867 419 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 MIR4286-201ENST00000580651 93 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC044792.1-201ENST00000593294 196 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC136601.2-201ENST00000604356 474 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 APOOP1-201ENST00000604695 592 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 AC016727.1-205ENST00000605437 569 ntBASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC113Q9H0I3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AC090740.1-201ENST00000623193 2262 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.324-201ENST00000365165 102 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 RNU6-213P-201ENST00000384051 104 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AL445189.1-201ENST00000405722 338 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 MTCO2P27-201ENST00000420740 428 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AC092047.1-201ENST00000424997 240 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 RPS3AP52-201ENST00000435639 297 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AL359672.1-201ENST00000442302 409 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 RPL32P28-201ENST00000443577 397 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms