Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
KRTAP4-3Q9BYR4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC063976.2-201ENST00000425667 3556 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC110716.2-201ENST00000563865 3945 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNA5SP305-201ENST00000362665 119 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-315P-201ENST00000362666 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-829P-201ENST00000363700 112 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-1048P-201ENST00000364054 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-936P-201ENST00000384005 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR135A2-201ENST00000384854 100 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR521-1-201ENST00000384902 87 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR589-201ENST00000385238 99 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-205P-201ENST00000390858 107 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNU6-278P-201ENST00000390945 109 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL11P3-201ENST00000395256 523 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 DHFRP6-201ENST00000401776 268 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL136372.1-201ENST00000403060 228 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR1182-201ENST00000408363 97 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNA5SP487-201ENST00000410186 122 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 SNORD12B-201ENST00000410433 91 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNF10P1-201ENST00000418589 369 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL031736.2-201ENST00000426573 787 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL358472.1-201ENST00000431295 329 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RPS29P10-201ENST00000439197 166 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RPL26P6-201ENST00000440913 438 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 EIF4A1P11-201ENST00000451239 222 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC005042.3-201ENST00000453230 174 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC231760.1-201ENST00000498002 260 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL671862.1-201ENST00000515851 349 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNA5SP228-201ENST00000516232 133 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RNA5SP392-201ENST00000516905 112 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 IGHVII-44-2-201ENST00000517728 250 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC021006.3-201ENST00000530771 192 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 BNIP3P1-201ENST00000547295 580 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC016256.1-201ENST00000547971 354 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC010547.7-201ENST00000570323 333 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC209154.1-201ENST00000582156 337 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL022345.2-201ENST00000606307 135 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC245517.5-201ENST00000611529 162 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR6133-201ENST00000617057 108 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 U6.73-201ENST00000619194 103 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 MIR6810-201ENST00000622701 70 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC069542.2-201ENST00000624816 216 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL034408.1-202ENST00000636088 415 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 OFD1P17-201ENST00000437639 3018 ntBASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-3Q9BYR4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms