Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 Y_RNA.498-201ENST00000384460 102 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 MIR130A-201ENST00000385274 89 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 RNU6-763P-201ENST00000390865 106 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 MIR1271-201ENST00000408537 86 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 MIR1302-4-201ENST00000408701 150 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC099782.1-201ENST00000425889 474 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC234771.2-201ENST00000445718 597 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AP002453.1-201ENST00000492327 668 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 RNA5SP96-201ENST00000516041 107 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC090281.1-201ENST00000523019 276 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC018448.1-201ENST00000552843 316 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC023043.3-201ENST00000593113 385 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 MIR6883-201ENST00000614952 78 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC099669.2-201ENST00000616549 437 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AL023881.1-201ENST00000621088 301 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC039056.2-201ENST00000622261 511 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC091932.3-201ENST00000624223 323 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AC018529.3-201ENST00000624212 2254 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 AL450326.2-201ENST00000421913 1962 ntBASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SSBP4Q9BWG4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 AC005332.5-201ENST00000591222 2919 ntBASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSBP4Q9BWG4 SNORA64.3-201ENST00000365647 134 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 RNU6-1310P-201ENST00000384153 107 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 MIR487A-201ENST00000385009 80 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 RPL17P36-201ENST00000420302 549 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AL358075.3-201ENST00000426289 226 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC023141.3-201ENST00000436698 278 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 U8.19-201ENST00000459095 133 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC092991.1-201ENST00000477176 376 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 RN7SL273P-201ENST00000481561 299 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 RPL36AP41-201ENST00000493820 306 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC098976.1-201ENST00000513014 541 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AL121603.1-201ENST00000553815 142 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC096996.1-201ENST00000563813 325 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 MIR744-201ENST00000578242 98 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 MIR4512-201ENST00000583257 77 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC068768.2-201ENST00000602352 343 ntBASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.15□□□□□ -1.75
SSBP4Q9BWG4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 PHKBP1-201ENST00000450951 1951 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AF127577.6-201ENST00000623352 2191 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 SNORD115-8-201ENST00000363856 82 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 RNU6-173P-201ENST00000364215 104 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 RNU6-1180P-201ENST00000364935 107 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 SNORD115-38-201ENST00000365037 82 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 RNU6-146P-201ENST00000384602 108 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 SNORA8.3-201ENST00000384679 139 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 U3.19-201ENST00000390893 196 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 OR2AM1P-201ENST00000422137 422 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC243964.1-201ENST00000441814 261 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 RN7SL570P-201ENST00000484405 292 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 RNU6-941P-201ENST00000516346 108 ntBASIC4.14□□□□□ -1.75
SSBP4Q9BWG4 SNORA43.2-201ENST00000516652 128 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms