Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
TUBA1CQ9BQE3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TUBA1CQ9BQE3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TUBA1CQ9BQE3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TUBA1CQ9BQE3 AC006020.1-201ENST00000420179 1854 ntBASIC3.2□□□□□ -1.9
TUBA1CQ9BQE3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
TUBA1CQ9BQE3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 HSPE1P11-201ENST00000339579 310 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RNU6-188P-201ENST00000364207 107 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 SNORA51.4-201ENST00000364993 124 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL109755.1-201ENST00000401791 649 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL136372.1-201ENST00000403060 228 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 SNRPEP10-201ENST00000420249 274 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL137014.1-201ENST00000420490 1226 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC093106.2-201ENST00000428212 385 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RPL35AP22-201ENST00000436855 335 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RPL23AP58-201ENST00000440453 469 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 MTND4P25-201ENST00000441039 533 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL590639.1-201ENST00000456484 337 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RNU6-261P-201ENST00000459506 102 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 SNORD27.1-201ENST00000516319 72 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RNU2-10P-201ENST00000516375 211 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 RNU7-51P-201ENST00000516560 62 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC103783.1-201ENST00000520506 373 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 ERHP1-201ENST00000523006 310 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC007458.1-201ENST00000542812 373 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 NRBF2P5-201ENST00000603087 788 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 MIR7851-201ENST00000610611 160 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC025253.1-201ENST00000613623 543 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC004696.1-201ENST00000614345 607 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 Y_RNA.804-201ENST00000615262 101 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL450472.3-201ENST00000615578 367 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AC104985.2-201ENST00000620598 500 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 AL645937.1-201ENST00000641739 1652 ntBASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
TUBA1CQ9BQE3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 MTND4P12-201ENST00000498999 1377 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RNA5SP387-201ENST00000364226 106 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RNU4-48P-201ENST00000365559 182 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RNU6-641P-201ENST00000384006 107 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RNU6-606P-201ENST00000384721 111 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RPL21P24-201ENST00000413752 448 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 OR51A5P-201ENST00000415429 942 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RPL21P111-201ENST00000418453 477 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 MTCYBP8-201ENST00000422855 651 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 ZNF863P-201ENST00000426746 417 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 MED13P1-201ENST00000428342 171 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 SAR1AP4-201ENST00000429225 591 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 ATP5JP1-201ENST00000431631 322 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 HMGB3P11-201ENST00000440127 604 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AL356010.1-201ENST00000456364 102 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RPS20P20-201ENST00000460498 340 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC093663.1-201ENST00000497190 394 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 MTCO2P30-201ENST00000503662 364 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC114786.4-201ENST00000508771 728 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 RNU6-875P-201ENST00000516488 106 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 OR5B19P-201ENST00000531766 928 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC055876.1-202ENST00000567053 138 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AC063943.3-201ENST00000615562 356 ntBASIC3.18□□□□□ -1.9
TUBA1CQ9BQE3 AL359314.1-201ENST00000616913 261 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms