Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CALR3Q96L12 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.17□□□□□ -1.58
CALR3Q96L12 AL731566.2-201ENST00000618971 317 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.17□□□□□ -1.58
CALR3Q96L12 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 AC011266.1-201ENST00000624119 3569 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CALR3Q96L12 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CALR3Q96L12 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CALR3Q96L12 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.16□□□□□ -1.58
CALR3Q96L12 MIR323A-201ENST00000362199 86 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 Y_RNA.405-201ENST00000383979 100 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 Y_RNA.451-201ENST00000384200 100 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 Y_RNA.524-201ENST00000384564 100 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 Y_RNA.561-201ENST00000384694 100 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.16□□□□□ -1.58
CALR3Q96L12 TMEM167AP1-201ENST00000423409 219 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 FTH1P6-201ENST00000430768 320 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 AL138899.2-201ENST00000439139 499 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.16□□□□□ -1.58
CALR3Q96L12 AL513124.1-201ENST00000450410 614 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 NUTF2P7-201ENST00000453086 375 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.16□□□□□ -1.58
CALR3Q96L12 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.16□□□□□ -1.58
CALR3Q96L12 AC074250.1-201ENST00000511117 192 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 RNU6-397P-201ENST00000516226 104 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 RNU2-58P-201ENST00000516403 183 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 RNA5SP43-201ENST00000516559 110 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 RNU6-897P-201ENST00000517135 105 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 RNU6-709P-201ENST00000517257 104 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CALR3Q96L12 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.16□□□□□ -1.58
CALR3Q96L12 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.16□□□□□ -1.58
CALR3Q96L12 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.16□□□□□ -1.58
CALR3Q96L12 AC060766.3-201ENST00000591442 263 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 IMMP1LP3-201ENST00000604197 224 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 AC012468.1-201ENST00000604888 430 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 AC022467.1-201ENST00000614738 749 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 AC103858.2-201ENST00000621471 543 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 U6.104-201ENST00000637979 90 ntBASIC5.16□□□□□ -1.58
CALR3Q96L12 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CALR3Q96L12 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CALR3Q96L12 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CALR3Q96L12 AL672296.1-201ENST00000427780 2158 ntBASIC5.15□□□□□ -1.58
CALR3Q96L12 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.15□□□□□ -1.58
CALR3Q96L12 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CALR3Q96L12 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.15□□□□□ -1.58
CALR3Q96L12 Y_RNA.19-201ENST00000362462 99 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 RNU1-76P-201ENST00000362903 159 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 RNU6-884P-201ENST00000363889 107 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 U3.13-201ENST00000364804 214 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CALR3Q96L12 RNU6-398P-201ENST00000384143 109 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 MIR921-201ENST00000401133 56 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 AL356968.1-201ENST00000416622 474 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 YPEL5P1-201ENST00000419731 367 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.15□□□□□ -1.59
CALR3Q96L12 AL591043.1-201ENST00000432461 424 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 AC000111.2-201ENST00000448200 210 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CALR3Q96L12 RPL23AP14-201ENST00000468281 468 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 AC034236.1-201ENST00000469891 373 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 RPL7AP6-201ENST00000477943 801 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.15□□□□□ -1.59
CALR3Q96L12 Y_RNA.706-201ENST00000516933 99 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CALR3Q96L12 SNORD95-201ENST00000579879 68 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.15□□□□□ -1.59
CALR3Q96L12 AL110115.1-201ENST00000614396 364 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 AC140113.4-201ENST00000622087 222 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 AC130454.1-201ENST00000622948 401 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CALR3Q96L12 Z75746.1-201ENST00000440243 2080 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CALR3Q96L12 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.15□□□□□ -1.59
CALR3Q96L12 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CALR3Q96L12 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CALR3Q96L12 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.15□□□□□ -1.59
CALR3Q96L12 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CALR3Q96L12 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.15□□□□□ -1.59
CALR3Q96L12 AP000560.1-201ENST00000624150 1937 ntBASIC5.15□□□□□ -1.59
CALR3Q96L12 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CALR3Q96L12 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CALR3Q96L12 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CALR3Q96L12 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CALR3Q96L12 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CALR3Q96L12 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CALR3Q96L12 RNU6-942P-201ENST00000363002 107 ntBASIC5.14□□□□□ -1.59
CALR3Q96L12 RN7SKP160-201ENST00000363804 340 ntBASIC5.14□□□□□ -1.59
CALR3Q96L12 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CALR3Q96L12 RPS6P12-201ENST00000432491 726 ntBASIC5.14□□□□□ -1.59
CALR3Q96L12 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.14□□□□□ -1.59
CALR3Q96L12 AC092647.2-201ENST00000452998 253 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms