Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AL645939.3-201ENST00000435408 225 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 RN7SL393P-201ENST00000463588 296 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 RPL27AP5-201ENST00000469428 449 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 AP005432.2-201ENST00000608162 586 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 AC010168.2-201ENST00000562691 5428 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 Y_RNA.96-201ENST00000363092 109 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 RNU1-84P-201ENST00000365447 164 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 Z98745.1-201ENST00000402553 494 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 MIR1185-2-201ENST00000408687 86 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC245291.1-201ENST00000419501 328 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC245884.2-201ENST00000426257 404 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC245291.3-201ENST00000443400 292 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 KF459542.1-201ENST00000450908 553 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC099670.1-201ENST00000455141 783 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC105137.2-201ENST00000569073 466 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 MIR3163-201ENST00000581592 73 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AL929325.1-201ENST00000603096 117 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AC012468.1-201ENST00000604888 430 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 MIR6823-201ENST00000622118 61 ntBASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MS4A3Q96HJ5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RNU6-170P-201ENST00000362832 104 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RNU6-486P-201ENST00000363116 107 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RNU4-13P-201ENST00000364019 141 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 LCN1P2-201ENST00000372030 223 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 MIR191-201ENST00000384873 92 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 MRPL35P3-201ENST00000421557 364 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RPL36AP10-201ENST00000421785 322 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 AC092017.2-201ENST00000427600 362 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 AP000281.1-201ENST00000444036 316 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 SNRPCP3-201ENST00000474888 476 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 AP005639.1-201ENST00000526939 192 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 MIR3157-201ENST00000578688 85 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 AC012531.4-201ENST00000616509 177 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 AC004925.1-201ENST00000624256 2706 ntBASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
MS4A3Q96HJ5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms