Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS33AQ96AX1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC103710.2-202ENST00000641454 2853 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 U3.4-201ENST00000363352 213 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 SNORA4.3-201ENST00000365564 137 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 RNU6-395P-201ENST00000365662 106 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 SNORA7.4-201ENST00000384249 137 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 RNU2-25P-201ENST00000411041 191 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 MTND1P26-201ENST00000440488 538 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AL161651.1-201ENST00000440882 223 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 RPL23AP20-201ENST00000447965 421 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 RPL23AP70-201ENST00000483361 460 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 SAP18P1-201ENST00000512058 390 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 RN7SKP40-201ENST00000517211 242 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 COX6CP5-201ENST00000527162 228 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AP003072.2-201ENST00000527756 676 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 HSPE1P20-201ENST00000538133 289 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC034105.4-201ENST00000568304 277 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 MIR3616-201ENST00000584070 92 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC073544.2-201ENST00000601155 540 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 NRBF2P5-201ENST00000603087 788 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AL139286.2-201ENST00000606838 396 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC018692.3-201ENST00000623929 123 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 MIR7515-201ENST00000637837 67 ntBASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VPS33AQ96AX1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AL355596.1-201ENST00000565399 3996 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 CDC27P3-201ENST00000635418 1910 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 Y_RNA.22-201ENST00000362492 102 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 RNU6-641P-201ENST00000384006 107 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 RNY3P9-201ENST00000384727 106 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 SNORA40C-201ENST00000391285 128 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 RNU6-248P-201ENST00000410720 107 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AL022238.1-201ENST00000442557 355 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 DPPA3P1-201ENST00000448050 469 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 FABP5P13-201ENST00000452144 328 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 NIPA2P5-201ENST00000452282 464 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC091153.1-201ENST00000466297 402 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC108078.2-201ENST00000510750 236 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC119751.5-201ENST00000514077 770 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 RNU6-572P-201ENST00000516724 80 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC025755.1-201ENST00000521306 278 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AP002453.2-201ENST00000533503 320 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC087883.1-201ENST00000551882 391 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 CYCSP39-201ENST00000565821 309 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 CLIC4P2-201ENST00000601934 717 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC025811.1-201ENST00000604312 472 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AL022154.1-201ENST00000604698 785 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC090578.1-201ENST00000604955 591 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC012409.4-201ENST00000612923 249 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 MIR6134-201ENST00000617606 109 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 MIR3974-201ENST00000637126 96 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 U6.105-201ENST00000637379 88 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS33AQ96AX1 MTND5P1-201ENST00000445440 1375 ntBASIC2.86□□□□□ -1.95
VPS33AQ96AX1 AC004520.1-201ENST00000608362 1413 ntBASIC2.85□□□□□ -1.95
VPS33AQ96AX1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS33AQ96AX1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms