Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TPTE2P4-201ENST00000258589 1605 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RNU6-451P-201ENST00000362921 107 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RNU1-18P-201ENST00000363062 164 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 SNORA48.5-201ENST00000391143 135 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 CISD1P1-201ENST00000393907 327 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL136116.1-201ENST00000403591 381 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RNU4-46P-201ENST00000410818 138 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL592045.1-201ENST00000429867 352 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL512844.2-201ENST00000433990 593 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RPL21P8-201ENST00000465083 535 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RPS29P25-201ENST00000481709 171 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 RN7SL504P-201ENST00000494496 287 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 FCF1P8-201ENST00000510322 597 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AC022690.1-201ENST00000526681 550 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 MIR5680-201ENST00000577577 84 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 MIR4276-201ENST00000584832 70 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 AL670379.4-201ENST00000605279 254 ntBASIC3.48□□□□□ -1.85
HMGB4Q8WW32 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGB4Q8WW32 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 RNU6-116P-201ENST00000384042 109 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 FAT1P1-201ENST00000406588 507 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 RNU6-1068P-201ENST00000410958 103 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 SNRPEP10-201ENST00000420249 274 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AL160275.3-201ENST00000423876 471 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AL591704.1-201ENST00000432574 275 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AC006028.1-201ENST00000438379 402 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 NFU1P2-201ENST00000448700 469 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 SUMO2P6-201ENST00000505273 288 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 SUB1P1-201ENST00000524415 382 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AL133241.1-201ENST00000556832 487 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AL138976.2-201ENST00000563989 694 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 DISC2.1-201ENST00000612827 205 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 SCARNA15.3-201ENST00000626315 122 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 SCARNA4.1-201ENST00000628597 123 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 Z99571.1-201ENST00000636677 394 ntBASIC3.47□□□□□ -1.85
HMGB4Q8WW32 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGB4Q8WW32 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.46□□□□□ -1.85
HMGB4Q8WW32 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.46□□□□□ -1.85
HMGB4Q8WW32 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HMGB4Q8WW32 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
HMGB4Q8WW32 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HMGB4Q8WW32 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.46□□□□□ -1.85
HMGB4Q8WW32 AL353743.1-202ENST00000431724 1695 ntBASIC3.46□□□□□ -1.85
HMGB4Q8WW32 AP001148.1-201ENST00000624124 2359 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RIOK3P1-201ENST00000418778 1528 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RNA5SP374-201ENST00000362939 125 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SNORA4.3-201ENST00000365564 137 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RNU6-877P-201ENST00000383868 107 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RPS4XP3-201ENST00000398541 413 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RNA5SP111-201ENST00000411386 101 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 GPM6BP2-201ENST00000432046 144 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGB4Q8WW32 GPM6BP1-201ENST00000446387 144 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AL671855.1-201ENST00000446875 1203 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 AC104058.1-201ENST00000448028 297 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SSXP4-201ENST00000451349 245 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 SNRPFP3-201ENST00000457792 225 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 RNU7-180P-201ENST00000459240 63 ntBASIC3.46□□□□□ -1.86
HMGB4Q8WW32 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms