Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR23B-201ENST00000384832 97 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 EBAG9P1-201ENST00000418955 543 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 HMGN2P27-201ENST00000427352 270 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 RPL21P129-201ENST00000491732 478 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 ATP5F1P5-201ENST00000526403 760 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AC093249.4-201ENST00000564755 259 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 BPIFA4P-203ENST00000603168 689 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 SNORD91B-202ENST00000608459 222 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AL731532.2-201ENST00000623542 1953 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AC107027.3-201ENST00000565095 3473 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 BCORP1-203ENST00000513194 5093 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-827P-201ENST00000365553 106 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-318P-201ENST00000384283 103 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-1179P-201ENST00000384667 107 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 Y_RNA.570-201ENST00000384750 101 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 SNORA57.1-201ENST00000391227 145 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 U3.30-201ENST00000391308 210 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 RPS4XP3-201ENST00000398541 413 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 LAP3P1-201ENST00000403648 294 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 SNORD56-201ENST00000413522 71 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 Z82188.1-201ENST00000436709 154 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 RANP8-201ENST00000444720 713 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 SNORA25.12-201ENST00000516202 82 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 MIR3160-1-201ENST00000577972 85 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 AC135776.4-201ENST00000624300 1904 ntBASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
NKX2-3Q8TAU0 AL451142.2-201ENST00000429076 2090 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-476P-201ENST00000384726 107 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 RPL7AP73-201ENST00000413490 353 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 AL512844.2-201ENST00000433990 593 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 RPS29P27-201ENST00000463711 170 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 RPL7AP28-201ENST00000464513 571 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 AC117440.1-201ENST00000474107 571 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 ENPP7P9-201ENST00000514456 627 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 RNA5SP230-201ENST00000517039 122 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 RN7SL690P-201ENST00000582087 240 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 MIR4660-201ENST00000583549 74 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 SAGE2P-201ENST00000420011 2126 ntBASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-3Q8TAU0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
NKX2-3Q8TAU0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 AC099654.2-201ENST00000433031 1980 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-211P-201ENST00000384047 107 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 RNA5SP187-201ENST00000384400 119 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 Y_RNA.542-201ENST00000384641 111 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 RNU2-2P-201ENST00000410396 191 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 HMGB1P27-201ENST00000431429 603 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 POLR2KP2-201ENST00000438155 177 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 RPS15AP34-201ENST00000487776 387 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 RPS27AP13-201ENST00000498403 237 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 SNORA40.9-201ENST00000515895 93 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 RN7SKP179-201ENST00000516126 217 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 MIR4715-201ENST00000584117 79 ntBASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.77□□□□□ -1.49
NKX2-3Q8TAU0 AL356218.2-201ENST00000605264 187 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms