Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 MIR3199-2-201ENST00000636243 86 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC233263.6-201ENST00000631132 1963 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 MIR369-201ENST00000362155 70 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RN7SKP227-201ENST00000364445 330 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RNU1-100P-201ENST00000365255 165 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP151-201ENST00000365632 117 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.395-201ENST00000383945 109 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RNU6-1040P-201ENST00000383974 107 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.404-201ENST00000383978 102 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 MIR143-201ENST00000385300 106 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RPS29P13-201ENST00000402041 169 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RN7SKP293-201ENST00000411389 296 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 AL714022.1-201ENST00000439897 151 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RPL12P11-201ENST00000439970 501 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 AC064862.4-201ENST00000442180 334 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 RNU7-170P-201ENST00000459303 61 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 AC017037.1-201ENST00000508460 471 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 PTP4A1P4-201ENST00000512479 322 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 HMGN2P15-201ENST00000585707 270 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 SRGNP1-201ENST00000603392 451 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 MIR432-201ENST00000606207 94 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.812-201ENST00000610788 101 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.784-201ENST00000613803 101 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.787-201ENST00000616522 101 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.780-201ENST00000617336 101 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.801-201ENST00000619005 101 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 AP001486.2-201ENST00000561652 5113 ntBASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLRN3Q8NCR9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RNU6-428P-201ENST00000362942 107 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RNU6-942P-201ENST00000363002 107 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RNU6-527P-201ENST00000363425 104 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RNU6-336P-201ENST00000364891 107 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RNU6-890P-201ENST00000384121 107 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.445-201ENST00000384168 102 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RN7SKP206-201ENST00000410823 293 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC005300.1-201ENST00000428401 373 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 SETP5-201ENST00000437270 562 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 CYCSP32-201ENST00000440548 321 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 FTH1P25-201ENST00000447665 469 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AL389915.2-201ENST00000454576 441 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RN7SL51P-201ENST00000468230 285 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 RNU6-976P-201ENST00000516086 111 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 ANP32BP3-201ENST00000559213 706 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC015720.2-201ENST00000567709 334 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 BNIP3P22-201ENST00000593399 556 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC011890.2-201ENST00000613393 294 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 AC074101.1-201ENST00000637861 241 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.66□□□□□ -1.82
CLRN3Q8NCR9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 AC007256.1-201ENST00000392253 2765 ntBASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.65□□□□□ -1.82
CLRN3Q8NCR9 MIR323A-201ENST00000362199 86 ntBASIC3.65□□□□□ -1.83
CLRN3Q8NCR9 RNA5SP319-201ENST00000362768 119 ntBASIC3.65□□□□□ -1.83
CLRN3Q8NCR9 RNU6-105P-201ENST00000363909 104 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms