Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RPL32P34-201ENST00000486380 400 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 RNU6-264P-201ENST00000517134 104 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 AP004607.1-201ENST00000524456 203 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 NACAP3-201ENST00000552100 481 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 AC105129.1-201ENST00000560250 297 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 AC009314.1-201ENST00000603871 304 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 AC092608.2-201ENST00000624427 218 ntBASIC5.16□□□□□ -1.58
RETREG2Q8NC44 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.16□□□□□ -1.58
RETREG2Q8NC44 AC092435.4-201ENST00000623012 4159 ntBASIC5.15□□□□□ -1.58
RETREG2Q8NC44 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RETREG2Q8NC44 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.15□□□□□ -1.58
RETREG2Q8NC44 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RETREG2Q8NC44 MTND5P7-201ENST00000413558 1798 ntBASIC5.15□□□□□ -1.58
RETREG2Q8NC44 RNU6-778P-201ENST00000363269 103 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 SNORA63C-201ENST00000364578 129 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 RNU6-72P-201ENST00000384285 79 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 SNORA41-201ENST00000384675 132 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 RNA5SP372-201ENST00000390836 115 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AL513475.1-201ENST00000406602 315 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 U3.37-201ENST00000408528 213 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 MIR2053-201ENST00000459295 91 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 RN7SL303P-201ENST00000469773 251 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC108022.1-201ENST00000493466 478 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 Y_RNA.687-201ENST00000516558 91 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 IGLVIV-65-201ENST00000517313 360 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC010186.2-204ENST00000537668 439 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 LINC00933-203ENST00000559812 219 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 H3F3AP1-201ENST00000559984 334 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 MIR3609-201ENST00000582661 80 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC016925.2-201ENST00000605108 242 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC008121.3-201ENST00000618726 433 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC073308.1-201ENST00000623696 305 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC125257.1-201ENST00000560400 2930 ntBASIC5.15□□□□□ -1.59
RETREG2Q8NC44 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.15□□□□□ -1.59
RETREG2Q8NC44 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 Y_RNA.28-201ENST00000362554 111 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RNU6-490P-201ENST00000362985 107 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RNU1-20P-201ENST00000363314 162 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RNU6-827P-201ENST00000365553 106 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RNU6-639P-201ENST00000384074 107 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 SNORA70C-201ENST00000384538 135 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 SDHCP2-201ENST00000398565 501 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AL035666.1-201ENST00000446195 348 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 HIGD1AP2-201ENST00000446367 280 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AL590664.1-201ENST00000448065 339 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RPL21P126-201ENST00000470049 478 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 SLC25A15P5-201ENST00000508033 253 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RNU6-377P-201ENST00000515965 102 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 HIGD1AP1-201ENST00000550979 275 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 MIR3138-201ENST00000585238 82 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RPL7P50-201ENST00000600588 727 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AL139395.1-201ENST00000603662 160 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 ARF4P1-201ENST00000605447 541 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 FP236240.3-201ENST00000623061 327 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 LINC01355-201ENST00000566551 5444 ntBASIC5.14□□□□□ -1.59
RETREG2Q8NC44 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.14□□□□□ -1.59
RETREG2Q8NC44 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.13□□□□□ -1.59
RETREG2Q8NC44 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RETREG2Q8NC44 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RETREG2Q8NC44 RPL9P7-201ENST00000330965 580 ntBASIC5.13□□□□□ -1.59
RETREG2Q8NC44 RNA5SP515-201ENST00000364570 118 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms