Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SNORD114-1-201ENST00000362705 72 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 RNU6-778P-201ENST00000363269 103 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 GSTA9P-201ENST00000406231 611 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 SNORA11.2-201ENST00000408318 127 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 MIR1284-201ENST00000408337 120 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 RNU2-68P-201ENST00000410878 191 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 OOSP1P1-201ENST00000423265 274 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 SKA2P1-201ENST00000425592 390 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 NANOGP2-201ENST00000435391 727 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 MTND1P28-201ENST00000435623 950 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 RPL23AP76-201ENST00000441860 458 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC020550.1-201ENST00000447385 163 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 UBL5P3-201ENST00000475112 231 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC022493.1-201ENST00000492984 337 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC026801.1-201ENST00000497178 464 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 SUMO2P5-201ENST00000506790 245 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC093752.1-206ENST00000511823 336 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 MTCO2P15-201ENST00000532655 656 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 MTND3P13-201ENST00000574391 343 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 MIR4765-201ENST00000585007 77 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL355598.1-201ENST00000604169 202 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AL158163.2-201ENST00000619110 700 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC098657.3-201ENST00000620434 263 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC012640.5-201ENST00000623897 319 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 AC004944.1-201ENST00000517807 3059 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 ADAM3A-203ENST00000461344 2157 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC009487.4-201ENST00000624969 3585 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 RNU6-298P-201ENST00000390888 96 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 VN1R51P-201ENST00000411675 945 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 BX276092.3-201ENST00000424182 230 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 TPT1P14-201ENST00000448018 505 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 FABP5P13-201ENST00000452144 328 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 CECR9-201ENST00000453421 199 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 MTND1P16-201ENST00000465177 898 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 DYNLL1P5-201ENST00000467158 270 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC072039.1-201ENST00000477611 581 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 HMGB1P36-201ENST00000487709 576 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC008837.2-201ENST00000513076 418 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 OR5AQ1P-201ENST00000527596 927 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC105245.1-201ENST00000581934 244 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 RPL21P136-201ENST00000605378 396 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 uc_338.14-201ENST00000613162 166 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC079416.3-201ENST00000624479 549 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC110994.2-201ENST00000635481 492 ntBASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.72□□□□□ -2.13
ZIC4Q8N9L1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RNU6-1167P-201ENST00000363227 94 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RNU6-560P-201ENST00000364007 108 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RNU6-289P-201ENST00000364093 107 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RNA5SP125-201ENST00000364843 120 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 SNORD23.1-201ENST00000408212 104 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 NPM1P11-201ENST00000417106 855 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 USP9YP26-201ENST00000421008 661 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AL109913.1-201ENST00000421173 514 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 USP9YP11-201ENST00000427537 717 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AC010153.1-201ENST00000432862 727 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms