Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CUL1P1-201ENST00000509510 2425 ntBASIC4.85□□□□□ -1.63
NPAS4Q8IUM7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
NPAS4Q8IUM7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS4Q8IUM7 AC107068.1-201ENST00000563286 4218 ntBASIC4.85□□□□□ -1.63
NPAS4Q8IUM7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NPAS4Q8IUM7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 MIR383-201ENST00000362257 73 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 RNU6-490P-201ENST00000362985 107 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 RNU1-132P-201ENST00000364300 164 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 RNU6-384P-201ENST00000364900 104 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 RNU6-166P-201ENST00000384371 107 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 Y_RNA.489-201ENST00000384410 101 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 U3.42-201ENST00000408746 214 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 PGBD4P6-201ENST00000421501 610 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 U8.21-201ENST00000459536 136 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 AC139453.3-201ENST00000493276 369 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 AC106785.1-201ENST00000565935 262 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 AL591034.3-201ENST00000605511 685 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 AC004852.3-201ENST00000614131 326 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 SCARNA4-202ENST00000625402 129 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 RNA5SP196-201ENST00000625967 102 ntBASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NPAS4Q8IUM7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPAS4Q8IUM7 AC092376.2-201ENST00000622621 4116 ntBASIC4.84□□□□□ -1.64
NPAS4Q8IUM7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NPAS4Q8IUM7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.84□□□□□ -1.64
NPAS4Q8IUM7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
NPAS4Q8IUM7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-37P-201ENST00000362692 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-11P-201ENST00000364234 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-7-201ENST00000364784 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-8-201ENST00000365467 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 UBBP2-201ENST00000376781 231 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-25P-201ENST00000383873 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-1-201ENST00000383898 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 Y_RNA.396-201ENST00000383949 103 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-48P-201ENST00000384161 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-217P-201ENST00000384164 104 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-36P-201ENST00000384172 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-4P-201ENST00000384205 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-5P-201ENST00000384238 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-3P-201ENST00000384314 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-16P-201ENST00000384385 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-15P-201ENST00000384534 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-2-201ENST00000384627 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-29P-201ENST00000384637 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-9-201ENST00000384776 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-33P-201ENST00000384793 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP317-201ENST00000410176 116 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP311-201ENST00000411290 116 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RPL26P27-201ENST00000414397 437 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 USP9YP30-201ENST00000430729 455 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 OR4C10P-201ENST00000434991 931 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 NOTCH2P1-201ENST00000443481 624 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC012671.1-201ENST00000451912 203 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC068781.1-201ENST00000488231 618 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 DEFB109F-201ENST00000491870 277 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP315-201ENST00000516340 116 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP309-201ENST00000516670 106 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP312-201ENST00000517068 116 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 SNORD116.3-201ENST00000517176 78 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC090281.1-201ENST00000523019 276 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC022882.1-201ENST00000532142 501 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC092447.9-201ENST00000603395 144 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 RNU6-6P-201ENST00000606623 107 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 AC140479.6-201ENST00000633535 357 ntBASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPAS4Q8IUM7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 MIR331-201ENST00000362302 94 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 Y_RNA.151-201ENST00000363566 112 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 Y_RNA.428-201ENST00000384078 102 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 RNU6-209P-201ENST00000384118 107 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 Y_RNA.447-201ENST00000384184 113 ntBASIC4.82□□□□□ -1.64
NPAS4Q8IUM7 RNU1-13P-201ENST00000384499 162 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms