Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 U3.53-201ENST00000628922 216 ntBASIC5.22□□□□□ -1.57
TRIM50Q86XT4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM50Q86XT4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM50Q86XT4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.21□□□□□ -1.57
TRIM50Q86XT4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.21□□□□□ -1.57
TRIM50Q86XT4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC021146.4-201ENST00000309229 279 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.27-201ENST00000362540 103 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.84-201ENST00000363011 104 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.416-201ENST00000384014 113 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 MIR34A-201ENST00000385130 110 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 MIR548H3-201ENST00000408771 118 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RNU2-33P-201ENST00000410344 192 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RNU6-1203P-201ENST00000410703 110 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RPL27AP8-201ENST00000424277 446 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AL356867.1-201ENST00000429623 299 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 PIGFP3-201ENST00000441918 722 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC079354.2-201ENST00000453523 154 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RPL23AP24-201ENST00000458203 385 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RNU7-87P-201ENST00000459343 62 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC104164.2-201ENST00000496953 495 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC091144.1-201ENST00000519573 138 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC004024.1-201ENST00000549244 247 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 SNRPGP15-201ENST00000600149 222 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AL139395.1-201ENST00000603662 160 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AL645944.1-201ENST00000603857 493 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC010900.2-201ENST00000604508 210 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC006077.1-201ENST00000604746 343 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC098479.1-201ENST00000609225 154 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 AC090617.7-201ENST00000623952 126 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TRIM50Q86XT4 RAD17P1-201ENST00000418130 2042 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 ZNF137P-201ENST00000456718 1920 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 OR14L1P-202ENST00000641545 3009 ntBASIC5.21□□□□□ -1.58
TRIM50Q86XT4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.358-201ENST00000365491 99 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.458-201ENST00000384240 102 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 MIR190B-201ENST00000401119 79 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AC104333.2-201ENST00000422630 192 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 RPS23P7-201ENST00000466210 444 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 RNU6-377P-201ENST00000515965 102 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AP002826.1-201ENST00000608835 315 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 AP001282.2-201ENST00000616149 309 ntBASIC5.2□□□□□ -1.58
TRIM50Q86XT4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TRIM50Q86XT4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.20-201ENST00000362479 113 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 U3.13-201ENST00000364804 214 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 SNORA71.2-201ENST00000364941 134 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 RNU6-338P-201ENST00000383888 105 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.405-201ENST00000383979 100 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.451-201ENST00000384200 100 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.524-201ENST00000384564 100 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.561-201ENST00000384694 100 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 MIR215-201ENST00000384858 110 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 SNORA40C-201ENST00000391285 128 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 NDUFB4P7-201ENST00000423198 363 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 RPL7AP25-201ENST00000423357 805 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AC096920.1-201ENST00000423991 241 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 SDAD1P3-201ENST00000427380 333 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AL358472.1-201ENST00000431295 329 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AL445433.1-201ENST00000457507 257 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 RN7SKP210-201ENST00000459176 261 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AC034236.1-201ENST00000469891 373 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 KC877373.1-201ENST00000479066 408 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AC010469.2-201ENST00000496412 480 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AC067942.3-201ENST00000512025 362 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 RNU6-572P-201ENST00000516724 80 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 RNA5SP165-201ENST00000517142 115 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 IGKV2-23-201ENST00000518729 323 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM50Q86XT4 RRN3P3-201ENST00000549207 578 ntBASIC5.19□□□□□ -1.58
TRIM50Q86XT4 AC010201.1-201ENST00000605051 540 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms