Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MTND2P4-201ENST00000445034 1004 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 WASF1P1-201ENST00000447560 1131 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AC003071.1-201ENST00000451219 789 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 RAP1BP2-201ENST00000478270 544 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 MRPS36P2-201ENST00000512569 299 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 MIR4782-201ENST00000577987 79 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 NRBF2P1-201ENST00000587407 859 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL137843.1-201ENST00000605078 385 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AC068276.1-201ENST00000605793 379 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AP002360.4-201ENST00000606980 481 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL359547.2-201ENST00000615810 418 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AC098679.4-201ENST00000624241 654 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 U6.99-201ENST00000637524 83 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 MTND4P5-201ENST00000435821 1374 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 NACAP2-201ENST00000318548 624 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 RN7SKP226-201ENST00000364912 300 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 RNU6-946P-201ENST00000383878 107 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 SNORD116-4-201ENST00000384733 96 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 MT-TH-201ENST00000387441 69 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AL592045.1-201ENST00000429867 352 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AL591704.1-201ENST00000432574 275 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC006028.1-201ENST00000438379 402 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 BRK1P2-201ENST00000442875 223 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC009296.1-201ENST00000443146 155 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 MTND1P27-201ENST00000451117 902 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 FABP5P13-201ENST00000452144 328 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AL033528.1-201ENST00000453780 140 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 BX510359.1-201ENST00000456973 237 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 RPS29P20-201ENST00000489592 171 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 RNU6-56P-201ENST00000516986 93 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC004944.1-201ENST00000517807 3059 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC068790.2-201ENST00000602601 557 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC012119.1-201ENST00000603184 222 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC007318.2-201ENST00000620999 243 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 AC010889.1-201ENST00000566193 2666 ntBASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NHLRC1Q6VVB1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 SMIM11P1-201ENST00000369586 178 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 SNORD67-201ENST00000390833 111 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 MTND1P34-201ENST00000438556 671 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 RPS24P13-201ENST00000442520 397 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 COX6CP2-201ENST00000444980 225 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 UBBP3-201ENST00000445497 241 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 RNA5SP269-201ENST00000459032 137 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 MTND3P7-201ENST00000474435 343 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 RPS3AP43-201ENST00000479743 781 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AP004217.1-201ENST00000480579 346 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC006445.1-201ENST00000491925 405 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC117522.1-201ENST00000509821 380 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC117532.1-201ENST00000514638 323 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 RN7SKP43-201ENST00000516173 320 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 RNU6-703P-201ENST00000516946 107 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 HMGB1P41-201ENST00000520234 440 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms