Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RNU6-39P-201ENST00000384344 107 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 RPL26P27-201ENST00000414397 437 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 RPL23AP83-201ENST00000434984 473 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 MTND6P13-201ENST00000443510 523 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 MRPL50P4-201ENST00000446432 475 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 ST13P20-201ENST00000447996 1065 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC098826.2-201ENST00000452011 651 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 RPS27AP8-201ENST00000452665 445 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 RNU6-953P-201ENST00000459154 107 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC105252.1-201ENST00000503089 286 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC118465.1-201ENST00000513820 1271 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 RNU7-51P-201ENST00000516560 62 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 RNU2-46P-201ENST00000517038 113 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC026241.1-201ENST00000517873 2142 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 OSBPL9P5-201ENST00000542581 171 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC011471.1-201ENST00000585766 187 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 BNIP3P8-201ENST00000597863 560 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AP002360.4-201ENST00000606980 481 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC093732.2-201ENST00000607950 274 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC069234.5-201ENST00000611056 416 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC013562.2-201ENST00000611632 603 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 AC097520.1-201ENST00000624435 385 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 MTND5P42-201ENST00000637720 498 ntBASIC2.79□□□□□ -1.96
CASC4Q6P4E1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CASC4Q6P4E1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 RPL23AP32-201ENST00000395315 459 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC092809.3-201ENST00000415453 231 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC098614.2-201ENST00000426040 255 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AL358075.3-201ENST00000426289 226 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 USP9YP15-201ENST00000442391 422 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 SNRPGP9-201ENST00000456025 225 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 SNRPFP4-201ENST00000456366 242 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 S100A11P2-201ENST00000467589 312 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 RPS29P26-201ENST00000477483 171 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC126182.1-201ENST00000478134 357 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 RN7SL297P-201ENST00000483161 293 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC119751.5-201ENST00000514077 770 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 HMGB1P41-201ENST00000520234 440 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AL359198.2-201ENST00000611836 194 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC130324.3-201ENST00000614165 542 ntBASIC2.78□□□□□ -1.96
CASC4Q6P4E1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CASC4Q6P4E1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AC110491.1-201ENST00000562191 2010 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 SNORA9-201ENST00000384215 133 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 SNORA48.5-201ENST00000391143 135 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 RPS3AP3-201ENST00000411933 242 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 HMGN1P14-201ENST00000412459 517 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL096701.2-201ENST00000416920 238 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 ELOCP4-201ENST00000420090 333 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL353729.1-201ENST00000425044 720 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AC137499.1-201ENST00000427602 88 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 HMGB1P9-201ENST00000429856 646 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 MTATP6P17-201ENST00000431030 672 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL591212.2-201ENST00000433923 257 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL022238.1-201ENST00000442557 355 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AIG1P1-201ENST00000503376 148 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AC117522.3-201ENST00000507974 584 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 AC113155.1-201ENST00000511141 769 ntBASIC2.77□□□□□ -1.97
CASC4Q6P4E1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms