Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 RNU2-43P-201ENST00000410306 190 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 SSXP9-201ENST00000417503 292 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 RPL23AP24-201ENST00000458203 385 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 MRPS36P2-201ENST00000512569 299 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 RNA5SP281-201ENST00000516504 135 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC025647.1-201ENST00000517879 253 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC016256.1-201ENST00000547971 354 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 VN1R85P-201ENST00000601587 426 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC024581.2-201ENST00000619986 252 ntBASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
VARS2Q5ST30 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
VARS2Q5ST30 TLK1P1-201ENST00000456760 2440 ntBASIC5.84□□□□□ -1.48
VARS2Q5ST30 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC026951.1-201ENST00000559530 2459 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 RNU6-1155P-201ENST00000363554 107 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 U8.4-201ENST00000363626 134 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 RNU6-873P-201ENST00000363833 107 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 RNU1-74P-201ENST00000384108 171 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 MIR141-201ENST00000384975 95 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AL603914.1-201ENST00000401964 204 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 U3.40-201ENST00000408706 208 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 FAR2P2-201ENST00000413041 594 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 YPEL5P1-201ENST00000419731 367 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC009220.1-201ENST00000451614 275 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC006463.2-201ENST00000473326 348 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 RN7SL222P-201ENST00000476452 299 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 GMPSP1-201ENST00000514075 579 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 AL671862.1-201ENST00000515851 349 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 SCARNA16.4-201ENST00000516956 187 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 AC136624.4-201ENST00000573044 370 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 RPL30P11-203ENST00000598995 310 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC5.83□□□□□ -1.48
VARS2Q5ST30 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VARS2Q5ST30 OR4F13P-202ENST00000560066 2054 ntBASIC5.83□□□□□ -1.48
VARS2Q5ST30 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARS2Q5ST30 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VARS2Q5ST30 U3.2-201ENST00000362981 210 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 NDUFS5P4-201ENST00000412983 318 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC234781.4-201ENST00000419384 244 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC108075.1-201ENST00000424692 529 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC091874.1-201ENST00000511402 339 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 IGKV2D-36-201ENST00000518643 226 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 HMGB1P40-201ENST00000525121 540 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC060780.2-201ENST00000589047 198 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC006380.1-201ENST00000603598 186 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 AL161798.1-201ENST00000604630 131 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 AC109583.2-201ENST00000617367 129 ntBASIC5.82□□□□□ -1.48
VARS2Q5ST30 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VARS2Q5ST30 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARS2Q5ST30 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
VARS2Q5ST30 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VARS2Q5ST30 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC093535.2-201ENST00000624769 2326 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms