Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU2-2P-201ENST00000410396 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 RNU6-1001P-201ENST00000411265 100 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 EIF1AXP1-201ENST00000419267 435 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF144AP50876 TPT1P12-201ENST00000448968 492 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 AC022795.1-201ENST00000473808 480 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 AF186996.7-201ENST00000492781 209 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 HMGB1P40-201ENST00000525121 540 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 AL391261.3-201ENST00000557194 520 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 RN7SL356P-201ENST00000582228 248 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF144AP50876 RNU2-4P-201ENST00000606190 192 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.15-201ENST00000611544 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.16-201ENST00000613119 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.12-201ENST00000613778 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.9-201ENST00000615427 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.11-201ENST00000616345 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.2-201ENST00000616535 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.3-201ENST00000617785 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 MIR6729-201ENST00000618194 65 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.19-201ENST00000618602 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 RNU2-1-201ENST00000618664 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.6-201ENST00000619225 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.5-201ENST00000619465 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 U2.10-201ENST00000620268 191 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF144AP50876 AC241585.2-209ENST00000638217 143 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF144AP50876 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RNF144AP50876 AC010332.2-201ENST00000613083 1904 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RNF144AP50876 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF144AP50876 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 AC063976.2-201ENST00000425667 3556 ntBASIC4.89□□□□□ -1.63
RNF144AP50876 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF144AP50876 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
RNF144AP50876 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF144AP50876 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RNF144AP50876 MIR10B-201ENST00000385011 110 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 AL357075.1-201ENST00000404107 726 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 RNA5SP44-201ENST00000410446 133 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF144AP50876 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF144AP50876 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 AC079780.1-201ENST00000428259 207 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 ANP32BP2-201ENST00000454525 545 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 RPS20P22-201ENST00000473700 357 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 RPS27AP9-201ENST00000477681 438 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 RNU6-1333P-201ENST00000516162 93 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 RNA5SP373-201ENST00000517271 95 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF144AP50876 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF144AP50876 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 AC233702.2-202ENST00000562547 291 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF144AP50876 AC069307.1-201ENST00000602820 447 ntBASIC4.88□□□□□ -1.63
RNF144AP50876 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF144AP50876 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF144AP50876 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF144AP50876 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF144AP50876 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF144AP50876 Y_RNA.127-201ENST00000363386 109 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 Y_RNA.182-201ENST00000363880 111 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 RNU6-1325P-201ENST00000364905 105 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 Y_RNA.412-201ENST00000384001 104 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 MIR153-1-201ENST00000384914 90 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 MIR143-201ENST00000385300 106 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 HLFP1-201ENST00000402375 499 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 CHEK2P5-201ENST00000423877 246 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF144AP50876 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF144AP50876 AC126177.5-201ENST00000549599 178 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 UBL5P4-201ENST00000562584 236 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 AC055872.1-201ENST00000570978 278 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF144AP50876 MIR548X2-201ENST00000579776 100 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 RN7SL753P-201ENST00000581238 290 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 AL162431.4-201ENST00000604674 411 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 MIR6862-1-201ENST00000613016 70 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 MIR6862-2-201ENST00000614755 70 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms