Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.88□□□□□ -1.95
NEDD4P46934 SDR42E1P2-201ENST00000614861 481 ntBASIC2.88□□□□□ -1.95
NEDD4P46934 AC008250.2-201ENST00000615261 205 ntBASIC2.88□□□□□ -1.95
NEDD4P46934 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD4P46934 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD4P46934 TEX21P-201ENST00000447107 1476 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AL136164.4-201ENST00000625013 2135 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 RNY3P13-201ENST00000365542 102 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD4P46934 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD4P46934 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.87□□□□□ -1.95
NEDD4P46934 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD4P46934 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD4P46934 RPL21P8-201ENST00000465083 535 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 MTCO2P29-201ENST00000465212 189 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 RPS27AP1-201ENST00000475545 471 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 ARL2BPP4-201ENST00000506854 471 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AC011979.2-201ENST00000527568 352 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AP003181.2-201ENST00000528941 181 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD4P46934 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.87□□□□□ -1.95
NEDD4P46934 HMGN1P30-201ENST00000589286 268 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AC079089.3-201ENST00000603094 673 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 SEPT7P9-203ENST00000604116 343 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.87□□□□□ -1.95
NEDD4P46934 AC108747.1-201ENST00000609508 535 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AL359198.2-201ENST00000611836 194 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AC091304.9-201ENST00000612091 226 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AL390240.1-201ENST00000612950 384 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 FRG1KP-201ENST00000623592 341 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 AC090582.1-201ENST00000636321 199 ntBASIC2.87□□□□□ -1.95
NEDD4P46934 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD4P46934 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NEDD4P46934 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD4P46934 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD4P46934 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD4P46934 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.86□□□□□ -1.95
NEDD4P46934 FARSBP1-201ENST00000435808 1778 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD4P46934 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD4P46934 RNY4P16-201ENST00000364768 94 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 MIR493-201ENST00000385254 89 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD4P46934 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD4P46934 AL589872.1-201ENST00000426602 288 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD4P46934 AC010153.1-201ENST00000432862 727 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 SNRPEP4-201ENST00000435815 279 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 MTCO1P19-201ENST00000443487 500 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 USP9YP29-201ENST00000445112 563 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 MTND1P27-201ENST00000451117 902 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD4P46934 RPL31P60-201ENST00000478450 367 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 MTND1P3-201ENST00000484956 952 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AC234781.5-201ENST00000508429 271 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 RNU6-826P-201ENST00000516827 104 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AL512310.1-201ENST00000548639 172 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AC024909.2-201ENST00000553035 286 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD4P46934 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD4P46934 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD4P46934 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD4P46934 MIR4293-201ENST00000584305 78 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 DUXAP4-201ENST00000603046 613 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AC109347.2-201ENST00000610220 349 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AL137847.3-201ENST00000611521 109 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AC004696.1-201ENST00000614345 607 ntBASIC2.86□□□□□ -1.95
NEDD4P46934 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD4P46934 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD4P46934 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
NEDD4P46934 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD4P46934 AC016717.2-201ENST00000609089 5141 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 Y_RNA.51-201ENST00000362725 102 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 RNU6-297P-201ENST00000384636 107 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NEDD4P46934 RPL23AP32-201ENST00000395315 459 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 RN7SKP140-201ENST00000411196 284 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD4P46934 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.85□□□□□ -1.95
NEDD4P46934 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD4P46934 AC119618.1-201ENST00000434191 222 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD4P46934 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.85□□□□□ -1.95
NEDD4P46934 USP9YP15-201ENST00000442391 422 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD4P46934 AC010631.1-201ENST00000474150 156 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AL049874.1-201ENST00000489560 388 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD4P46934 AC010587.1-201ENST00000505809 469 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 SNORA31.1-201ENST00000515993 133 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 SNORA31.5-201ENST00000516190 133 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 RNU6-390P-201ENST00000516259 103 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 RNU2-10P-201ENST00000516375 211 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 RNU2-46P-201ENST00000517038 113 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.85□□□□□ -1.95
NEDD4P46934 AP001646.1-201ENST00000527936 915 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 AP002963.1-201ENST00000530590 184 ntBASIC2.85□□□□□ -1.95
NEDD4P46934 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD4P46934 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms