Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A4P31645 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A4P31645 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A4P31645 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A4P31645 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC6A4P31645 Y_RNA.58-201ENST00000362807 102 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 Y_RNA.154-201ENST00000363624 102 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 RNU6-288P-201ENST00000363690 104 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 RNY3P1-201ENST00000365085 102 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 RNU6-715P-201ENST00000365204 103 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 RNY3-201ENST00000365484 102 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 Y_RNA.490-201ENST00000384413 102 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 MIR514A1-201ENST00000385133 98 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 SNORA16.2-201ENST00000390991 127 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 HSPE1P8-201ENST00000406997 288 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AC092809.3-201ENST00000415453 231 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 RPLP0P7-201ENST00000416050 667 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A4P31645 MTCO2P27-201ENST00000420740 428 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AC091286.1-201ENST00000431233 461 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AC007677.1-201ENST00000445757 515 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC107399.1-201ENST00000451226 265 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 Y_RNA.632-201ENST00000459189 102 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 DYNLL1P5-201ENST00000467158 270 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A4P31645 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AC104619.4-201ENST00000510773 249 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A4P31645 SCARNA15.2-201ENST00000516409 127 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 RNU6-256P-201ENST00000516747 97 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 SNORA25.17-201ENST00000517184 124 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC026403.1-201ENST00000518938 295 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 ATP5F1P5-201ENST00000526403 760 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AP002826.1-201ENST00000608835 315 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 AC022418.1-201ENST00000624118 445 ntBASIC3.82□□□□□ -1.8
SLC6A4P31645 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.82□□□□□ -1.8
SLC6A4P31645 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A4P31645 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A4P31645 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC6A4P31645 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC6A4P31645 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC6A4P31645 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC6A4P31645 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
SLC6A4P31645 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC6A4P31645 FRG1CP-201ENST00000358464 769 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 RNU6-254P-201ENST00000363377 107 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 SNORA63-201ENST00000363450 132 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 RNU6-1227P-201ENST00000383981 107 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AC074085.1-201ENST00000413598 418 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AC091390.3-201ENST00000426478 338 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 ATP5HP2-201ENST00000433885 485 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC6A4P31645 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 RPS15AP34-201ENST00000487776 387 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC069499.1-201ENST00000489433 509 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC078918.1-201ENST00000498515 228 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 HMGN1P11-201ENST00000508668 303 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AC023141.12-201ENST00000512399 199 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 RNU2-69P-201ENST00000516061 100 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 CYCSP27-201ENST00000527643 293 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC6A4P31645 MIR5692A1-201ENST00000580523 69 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 MIR3942-201ENST00000585264 109 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AC002545.1-201ENST00000592511 181 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 SRGNP1-201ENST00000603392 451 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AL133255.1-201ENST00000606374 441 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 AL355810.1-201ENST00000614629 552 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AL133216.2-202ENST00000634512 349 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SLC6A4P31645 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.81□□□□□ -1.8
SLC6A4P31645 AL079305.1-201ENST00000623159 3008 ntBASIC3.81□□□□□ -1.8
SLC6A4P31645 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SLC6A4P31645 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.81□□□□□ -1.8
SLC6A4P31645 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms