Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UQCRHP4-201ENST00000471686 272 ntBASIC3.79□□□□□ -1.8
CD40P25942 AC091167.1-201ENST00000492017 396 ntBASIC3.79□□□□□ -1.8
CD40P25942 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.79□□□□□ -1.8
CD40P25942 PTP4A1P4-201ENST00000512479 322 ntBASIC3.79□□□□□ -1.8
CD40P25942 RNU6-120P-201ENST00000516077 103 ntBASIC3.79□□□□□ -1.8
CD40P25942 RNU6-1045P-201ENST00000516321 107 ntBASIC3.79□□□□□ -1.8
CD40P25942 RNU6-703P-201ENST00000516946 107 ntBASIC3.79□□□□□ -1.8
CD40P25942 RNU6-1183P-201ENST00000517054 60 ntBASIC3.79□□□□□ -1.8
CD40P25942 ATP5J2P6-201ENST00000565203 266 ntBASIC3.79□□□□□ -1.8
CD40P25942 AC233702.9-201ENST00000581528 203 ntBASIC3.79□□□□□ -1.8
CD40P25942 RNF138P2-201ENST00000603490 592 ntBASIC3.79□□□□□ -1.8
CD40P25942 AC009314.1-201ENST00000603871 304 ntBASIC3.79□□□□□ -1.8
CD40P25942 AL355598.1-201ENST00000604169 202 ntBASIC3.79□□□□□ -1.8
CD40P25942 MIR3976-201ENST00000606807 139 ntBASIC3.79□□□□□ -1.8
CD40P25942 AL445567.2-201ENST00000618935 498 ntBASIC3.79□□□□□ -1.8
CD40P25942 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CD40P25942 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
CD40P25942 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD40P25942 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.79□□□□□ -1.8
CD40P25942 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD40P25942 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.79□□□□□ -1.8
CD40P25942 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD40P25942 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD40P25942 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD40P25942 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD40P25942 ZNF807-201ENST00000328088 1707 ntBASIC3.78□□□□□ -1.8
CD40P25942 MTND5P30-201ENST00000452896 1731 ntBASIC3.78□□□□□ -1.8
CD40P25942 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.78□□□□□ -1.8
CD40P25942 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CD40P25942 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 Y_RNA.28-201ENST00000362554 111 ntBASIC3.78□□□□□ -1.8
CD40P25942 RNU1-108P-201ENST00000362556 161 ntBASIC3.78□□□□□ -1.8
CD40P25942 RNU6-884P-201ENST00000363889 107 ntBASIC3.78□□□□□ -1.8
CD40P25942 RNU1-132P-201ENST00000364300 164 ntBASIC3.78□□□□□ -1.8
CD40P25942 RNU6-1317P-201ENST00000364582 104 ntBASIC3.78□□□□□ -1.8
CD40P25942 RNU6-738P-201ENST00000384531 106 ntBASIC3.78□□□□□ -1.8
CD40P25942 MIR708-201ENST00000390708 88 ntBASIC3.78□□□□□ -1.8
CD40P25942 AL591034.1-201ENST00000407447 340 ntBASIC3.78□□□□□ -1.8
CD40P25942 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 RPS15AP10-201ENST00000432472 382 ntBASIC3.78□□□□□ -1.8
CD40P25942 RPL23AP52-201ENST00000439311 478 ntBASIC3.78□□□□□ -1.8
CD40P25942 DAP3P1-201ENST00000441522 278 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC105137.1-201ENST00000484355 562 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC022493.2-201ENST00000506122 481 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 RNU6-307P-201ENST00000516743 106 ntBASIC3.78□□□□□ -1.8
CD40P25942 RN7SKP295-201ENST00000517264 153 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.78□□□□□ -1.8
CD40P25942 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.78□□□□□ -1.8
CD40P25942 AC063950.1-201ENST00000552036 308 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC103996.1-201ENST00000555468 102 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 CYCSP39-201ENST00000565821 309 ntBASIC3.78□□□□□ -1.8
CD40P25942 AC023043.4-201ENST00000612081 449 ntBASIC3.78□□□□□ -1.8
CD40P25942 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 U2.21-201ENST00000637295 81 ntBASIC3.78□□□□□ -1.8
CD40P25942 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
CD40P25942 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD40P25942 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CD40P25942 CUL1P1-201ENST00000509510 2425 ntBASIC3.78□□□□□ -1.81
CD40P25942 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.77□□□□□ -1.81
CD40P25942 AL158163.1-201ENST00000603915 1649 ntBASIC3.77□□□□□ -1.81
CD40P25942 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD40P25942 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
CD40P25942 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.77□□□□□ -1.81
CD40P25942 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD40P25942 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CD40P25942 AC022336.2-201ENST00000568966 2538 ntBASIC3.77□□□□□ -1.81
CD40P25942 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD40P25942 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.77□□□□□ -1.81
CD40P25942 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CD40P25942 RPL9P7-201ENST00000330965 580 ntBASIC3.77□□□□□ -1.81
CD40P25942 RNA5SP307-201ENST00000362863 116 ntBASIC3.77□□□□□ -1.81
CD40P25942 RNU6-778P-201ENST00000363269 103 ntBASIC3.77□□□□□ -1.81
CD40P25942 RN7SKP227-201ENST00000364445 330 ntBASIC3.77□□□□□ -1.81
CD40P25942 SNORA63C-201ENST00000364578 129 ntBASIC3.77□□□□□ -1.81
CD40P25942 RNA5SP151-201ENST00000365632 117 ntBASIC3.77□□□□□ -1.81
CD40P25942 RNU1-73P-201ENST00000383971 164 ntBASIC3.77□□□□□ -1.81
CD40P25942 Y_RNA.463-201ENST00000384271 102 ntBASIC3.77□□□□□ -1.81
CD40P25942 RNU6-72P-201ENST00000384285 79 ntBASIC3.77□□□□□ -1.81
CD40P25942 RNU6-1160P-201ENST00000384546 104 ntBASIC3.77□□□□□ -1.81
CD40P25942 AL513475.1-201ENST00000406602 315 ntBASIC3.77□□□□□ -1.81
CD40P25942 AL117339.3-201ENST00000418733 162 ntBASIC3.77□□□□□ -1.81
CD40P25942 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.77□□□□□ -1.81
CD40P25942 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.77□□□□□ -1.81
CD40P25942 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.77□□□□□ -1.81
CD40P25942 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.77□□□□□ -1.81
CD40P25942 AL513043.1-201ENST00000439124 535 ntBASIC3.77□□□□□ -1.81
CD40P25942 AL035666.1-201ENST00000446195 348 ntBASIC3.77□□□□□ -1.81
CD40P25942 HMGB3P8-201ENST00000449709 577 ntBASIC3.77□□□□□ -1.81
CD40P25942 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD40P25942 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms