Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 MTND5P7-201ENST00000413558 1798 ntBASIC5.22□□□□□ -1.57
RFX1P22670 SALL4P2-201ENST00000423288 2910 ntBASIC5.22□□□□□ -1.57
RFX1P22670 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX1P22670 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX1P22670 AC126755.2-208ENST00000327792 462 ntBASIC5.22□□□□□ -1.57
RFX1P22670 AC138969.1-213ENST00000331436 462 ntBASIC5.22□□□□□ -1.57
RFX1P22670 RNA5SP167-201ENST00000365461 116 ntBASIC5.22□□□□□ -1.57
RFX1P22670 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RFX1P22670 RPL21P1-201ENST00000399532 476 ntBASIC5.22□□□□□ -1.57
RFX1P22670 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.22□□□□□ -1.57
RFX1P22670 RNA5SP113-201ENST00000410486 84 ntBASIC5.22□□□□□ -1.57
RFX1P22670 RNU6-847P-201ENST00000411115 108 ntBASIC5.22□□□□□ -1.57
RFX1P22670 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX1P22670 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX1P22670 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX1P22670 DYNLT3P2-201ENST00000442517 295 ntBASIC5.22□□□□□ -1.57
RFX1P22670 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 NDUFS5P3-201ENST00000450668 321 ntBASIC5.22□□□□□ -1.57
RFX1P22670 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX1P22670 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX1P22670 RPL30P10-201ENST00000488148 337 ntBASIC5.22□□□□□ -1.57
RFX1P22670 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX1P22670 RNU6-612P-201ENST00000516909 102 ntBASIC5.22□□□□□ -1.57
RFX1P22670 AP004242.1-201ENST00000533701 349 ntBASIC5.22□□□□□ -1.57
RFX1P22670 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX1P22670 AC006600.1-201ENST00000572529 153 ntBASIC5.22□□□□□ -1.57
RFX1P22670 MIR3690-201ENST00000580266 75 ntBASIC5.22□□□□□ -1.57
RFX1P22670 RNF138P2-201ENST00000603490 592 ntBASIC5.22□□□□□ -1.57
RFX1P22670 AL121932.1-201ENST00000605542 214 ntBASIC5.22□□□□□ -1.57
RFX1P22670 MIR1244-1-201ENST00000612829 85 ntBASIC5.22□□□□□ -1.57
RFX1P22670 HMGB1P24-202ENST00000615653 685 ntBASIC5.22□□□□□ -1.57
RFX1P22670 MIR8062-201ENST00000621515 85 ntBASIC5.22□□□□□ -1.57
RFX1P22670 AP001642.1-201ENST00000624727 2117 ntBASIC5.22□□□□□ -1.57
RFX1P22670 MIR1244-3-201ENST00000635744 85 ntBASIC5.22□□□□□ -1.57
RFX1P22670 MIR1244-2-201ENST00000636449 85 ntBASIC5.22□□□□□ -1.57
RFX1P22670 MIR1244-4-202ENST00000636813 85 ntBASIC5.22□□□□□ -1.57
RFX1P22670 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX1P22670 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX1P22670 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RFX1P22670 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX1P22670 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
RFX1P22670 AC090740.1-201ENST00000623193 2262 ntBASIC5.21□□□□□ -1.58
RFX1P22670 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX1P22670 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX1P22670 RNU5E-7P-201ENST00000365290 117 ntBASIC5.21□□□□□ -1.58
RFX1P22670 RNU6-217P-201ENST00000384164 104 ntBASIC5.21□□□□□ -1.58
RFX1P22670 RNU6-72P-201ENST00000384285 79 ntBASIC5.21□□□□□ -1.58
RFX1P22670 Y_RNA.551-201ENST00000384661 102 ntBASIC5.21□□□□□ -1.58
RFX1P22670 SAR1AP2-201ENST00000392696 594 ntBASIC5.21□□□□□ -1.58
RFX1P22670 AC114755.2-201ENST00000413520 361 ntBASIC5.21□□□□□ -1.58
RFX1P22670 AC007098.1-201ENST00000420122 367 ntBASIC5.21□□□□□ -1.58
RFX1P22670 RPS17P8-201ENST00000434525 335 ntBASIC5.21□□□□□ -1.58
RFX1P22670 NDUFB4P6-201ENST00000436819 366 ntBASIC5.21□□□□□ -1.58
RFX1P22670 AL356535.1-201ENST00000440335 398 ntBASIC5.21□□□□□ -1.58
RFX1P22670 RPS3AP12-201ENST00000443616 753 ntBASIC5.21□□□□□ -1.58
RFX1P22670 RPS3AP46-201ENST00000448352 682 ntBASIC5.21□□□□□ -1.58
RFX1P22670 OR2AQ1P-201ENST00000451972 200 ntBASIC5.21□□□□□ -1.58
RFX1P22670 MTATP6P7-201ENST00000453315 681 ntBASIC5.21□□□□□ -1.58
RFX1P22670 MTCO3P8-201ENST00000453691 755 ntBASIC5.21□□□□□ -1.58
RFX1P22670 RNU7-169P-201ENST00000459456 61 ntBASIC5.21□□□□□ -1.58
RFX1P22670 S100A11P1-201ENST00000477525 312 ntBASIC5.21□□□□□ -1.58
RFX1P22670 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.21□□□□□ -1.58
RFX1P22670 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX1P22670 AC010265.1-201ENST00000513509 211 ntBASIC5.21□□□□□ -1.58
RFX1P22670 FTH1P11-201ENST00000517577 551 ntBASIC5.21□□□□□ -1.58
RFX1P22670 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.21□□□□□ -1.58
RFX1P22670 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX1P22670 AL391358.1-201ENST00000605342 190 ntBASIC5.21□□□□□ -1.58
RFX1P22670 FTX_3.1-201ENST00000610451 147 ntBASIC5.21□□□□□ -1.58
RFX1P22670 MIR7703-201ENST00000620784 77 ntBASIC5.21□□□□□ -1.58
RFX1P22670 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RFX1P22670 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RFX1P22670 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX1P22670 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RFX1P22670 AC006971.1-201ENST00000407916 4486 ntBASIC5.2□□□□□ -1.58
RFX1P22670 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 RNU6-50P-201ENST00000362356 103 ntBASIC5.2□□□□□ -1.58
RFX1P22670 RNU6-874P-201ENST00000362390 105 ntBASIC5.2□□□□□ -1.58
RFX1P22670 RNU6-600P-201ENST00000362524 99 ntBASIC5.2□□□□□ -1.58
RFX1P22670 RNA5SP191-201ENST00000362585 102 ntBASIC5.2□□□□□ -1.58
RFX1P22670 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 RNU6-784P-201ENST00000384330 106 ntBASIC5.2□□□□□ -1.58
RFX1P22670 RNU6-700P-201ENST00000391043 107 ntBASIC5.2□□□□□ -1.58
RFX1P22670 AL592291.1-201ENST00000403830 352 ntBASIC5.2□□□□□ -1.58
RFX1P22670 MTCYBP2-201ENST00000407745 171 ntBASIC5.2□□□□□ -1.58
RFX1P22670 RNA5SP31-201ENST00000411144 127 ntBASIC5.2□□□□□ -1.58
RFX1P22670 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX1P22670 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX1P22670 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX1P22670 PCNPP5-201ENST00000452246 481 ntBASIC5.2□□□□□ -1.58
RFX1P22670 RPS29P27-201ENST00000463711 170 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms