Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORA31.1-201ENST00000515993 133 ntBASIC4.16□□□□□ -1.74
ATF4P18848 RNU6-120P-201ENST00000516077 103 ntBASIC4.16□□□□□ -1.74
ATF4P18848 SNORA31.5-201ENST00000516190 133 ntBASIC4.16□□□□□ -1.74
ATF4P18848 SCARNA16.4-201ENST00000516956 187 ntBASIC4.16□□□□□ -1.74
ATF4P18848 IGLV2-28-201ENST00000520681 304 ntBASIC4.16□□□□□ -1.74
ATF4P18848 AC012339.2-201ENST00000523996 453 ntBASIC4.16□□□□□ -1.74
ATF4P18848 AC006199.1-201ENST00000548728 219 ntBASIC4.16□□□□□ -1.74
ATF4P18848 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 MRPS21P7-201ENST00000566937 238 ntBASIC4.16□□□□□ -1.74
ATF4P18848 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.16□□□□□ -1.74
ATF4P18848 MIR4443-201ENST00000585052 53 ntBASIC4.16□□□□□ -1.74
ATF4P18848 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.16□□□□□ -1.74
ATF4P18848 7SK.7-201ENST00000603504 247 ntBASIC4.16□□□□□ -1.74
ATF4P18848 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.16□□□□□ -1.74
ATF4P18848 MIR3529-201ENST00000637713 78 ntBASIC4.16□□□□□ -1.74
ATF4P18848 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 AP001148.1-201ENST00000624124 2359 ntBASIC4.16□□□□□ -1.74
ATF4P18848 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATF4P18848 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATF4P18848 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATF4P18848 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATF4P18848 AC233263.6-201ENST00000631132 1963 ntBASIC4.15□□□□□ -1.74
ATF4P18848 AC004944.1-201ENST00000517807 3059 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.15□□□□□ -1.75
ATF4P18848 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATF4P18848 RN7SKP124-201ENST00000364730 341 ntBASIC4.15□□□□□ -1.75
ATF4P18848 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.15□□□□□ -1.75
ATF4P18848 Y_RNA.533-201ENST00000384596 114 ntBASIC4.15□□□□□ -1.75
ATF4P18848 MIR105-2-201ENST00000385083 81 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AP000275.1-201ENST00000411943 390 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.15□□□□□ -1.75
ATF4P18848 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.15□□□□□ -1.75
ATF4P18848 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.15□□□□□ -1.75
ATF4P18848 PSMD10P3-201ENST00000437000 448 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.15□□□□□ -1.75
ATF4P18848 FTH1P2-201ENST00000466086 412 ntBASIC4.15□□□□□ -1.75
ATF4P18848 RPS26P28-201ENST00000470806 348 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AC092754.1-201ENST00000472975 479 ntBASIC4.15□□□□□ -1.75
ATF4P18848 RNA5SP362-201ENST00000516048 118 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.15□□□□□ -1.75
ATF4P18848 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.15□□□□□ -1.75
ATF4P18848 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.15□□□□□ -1.75
ATF4P18848 CYCSP40-201ENST00000575927 294 ntBASIC4.15□□□□□ -1.75
ATF4P18848 MIR1273E-201ENST00000581165 102 ntBASIC4.15□□□□□ -1.75
ATF4P18848 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.15□□□□□ -1.75
ATF4P18848 AP001836.1-201ENST00000604675 523 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AC116312.1-201ENST00000606841 314 ntBASIC4.15□□□□□ -1.75
ATF4P18848 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.15□□□□□ -1.75
ATF4P18848 AC097372.5-201ENST00000623665 376 ntBASIC4.15□□□□□ -1.75
ATF4P18848 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATF4P18848 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATF4P18848 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.15□□□□□ -1.75
ATF4P18848 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATF4P18848 SRRM1P3-201ENST00000426911 2678 ntBASIC4.15□□□□□ -1.75
ATF4P18848 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
ATF4P18848 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.15□□□□□ -1.75
ATF4P18848 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ATF4P18848 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ATF4P18848 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
ATF4P18848 AC066616.2-201ENST00000559334 1481 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 SNORD56.1-201ENST00000362913 68 ntBASIC4.14□□□□□ -1.75
ATF4P18848 U3.6-201ENST00000363622 211 ntBASIC4.14□□□□□ -1.75
ATF4P18848 SNORD74.4-201ENST00000364129 80 ntBASIC4.14□□□□□ -1.75
ATF4P18848 Y_RNA.314-201ENST00000365114 102 ntBASIC4.14□□□□□ -1.75
ATF4P18848 SNORD6-201ENST00000365444 73 ntBASIC4.14□□□□□ -1.75
ATF4P18848 RNA5SP131-201ENST00000365452 119 ntBASIC4.14□□□□□ -1.75
ATF4P18848 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 RNY1P14-201ENST00000384426 108 ntBASIC4.14□□□□□ -1.75
ATF4P18848 RNU6-700P-201ENST00000391043 107 ntBASIC4.14□□□□□ -1.75
ATF4P18848 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 MRPL42P3-201ENST00000401492 326 ntBASIC4.14□□□□□ -1.75
ATF4P18848 RNU6-1077P-201ENST00000410506 102 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.14□□□□□ -1.75
ATF4P18848 FAR2P2-201ENST00000413041 594 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC074117.2-201ENST00000417130 397 ntBASIC4.14□□□□□ -1.75
ATF4P18848 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.14□□□□□ -1.75
ATF4P18848 AC245291.1-201ENST00000419501 328 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 OR6D1P-201ENST00000436165 939 ntBASIC4.14□□□□□ -1.75
ATF4P18848 RPS15AP5-201ENST00000436276 388 ntBASIC4.14□□□□□ -1.75
ATF4P18848 HMGN2P20-201ENST00000437531 273 ntBASIC4.14□□□□□ -1.75
ATF4P18848 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATF4P18848 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.14□□□□□ -1.75
ATF4P18848 AC000111.2-201ENST00000448200 210 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.14□□□□□ -1.75
ATF4P18848 RPS29P27-201ENST00000463711 170 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC015911.1-201ENST00000495111 156 ntBASIC4.14□□□□□ -1.75
ATF4P18848 SNORA43.3-201ENST00000517240 103 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC010653.1-201ENST00000571108 881 ntBASIC4.14□□□□□ -1.75
ATF4P18848 AC009163.5-201ENST00000575421 637 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms