Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 HMGB1P27-201ENST00000431429 603 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.32□□□□□ -1.88
CTPS1P17812 FABP5P13-201ENST00000452144 328 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 CACYBPP2-201ENST00000453625 678 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.32□□□□□ -1.88
CTPS1P17812 AC091153.1-201ENST00000466297 402 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 GMFBP1-201ENST00000467831 427 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.32□□□□□ -1.88
CTPS1P17812 AC105417.1-201ENST00000514691 285 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 RNU6-677P-201ENST00000516914 101 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 RNU6-835P-201ENST00000516974 104 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.32□□□□□ -1.88
CTPS1P17812 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.32□□□□□ -1.88
CTPS1P17812 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.32□□□□□ -1.88
CTPS1P17812 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.32□□□□□ -1.88
CTPS1P17812 AP001486.3-201ENST00000615334 372 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 AC090132.2-201ENST00000615881 347 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.32□□□□□ -1.88
CTPS1P17812 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.32□□□□□ -1.88
CTPS1P17812 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.32□□□□□ -1.88
CTPS1P17812 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
CTPS1P17812 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTPS1P17812 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTPS1P17812 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CTPS1P17812 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CTPS1P17812 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 Y_RNA.255-201ENST00000364581 97 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RNU6-877P-201ENST00000383868 107 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RNU6-14P-201ENST00000384630 106 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 FAT1P1-201ENST00000406588 507 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RNU6-908P-201ENST00000410160 94 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RNU6-387P-201ENST00000411331 105 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.31□□□□□ -1.88
CTPS1P17812 AC091390.3-201ENST00000426478 338 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AL590383.1-201ENST00000428602 75 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AC005326.1-201ENST00000429197 123 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 GTF2IP20-201ENST00000431663 360 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.31□□□□□ -1.88
CTPS1P17812 NEK4P1-201ENST00000433383 879 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 SNRPEP4-201ENST00000435815 279 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.31□□□□□ -1.88
CTPS1P17812 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.31□□□□□ -1.88
CTPS1P17812 MTND1P18-201ENST00000448191 573 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 NFU1P2-201ENST00000448700 469 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AL162395.1-201ENST00000457882 422 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RNU6-953P-201ENST00000459154 107 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AL163973.1-201ENST00000484753 577 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.31□□□□□ -1.88
CTPS1P17812 AC004024.1-201ENST00000549244 247 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.31□□□□□ -1.88
CTPS1P17812 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.31□□□□□ -1.88
CTPS1P17812 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.31□□□□□ -1.88
CTPS1P17812 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 AC012409.4-201ENST00000612923 249 ntBASIC3.31□□□□□ -1.88
CTPS1P17812 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.31□□□□□ -1.88
CTPS1P17812 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
CTPS1P17812 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTPS1P17812 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.31□□□□□ -1.88
CTPS1P17812 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTPS1P17812 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CTPS1P17812 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTPS1P17812 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTPS1P17812 Y_RNA.38-201ENST00000362617 102 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 RNY3P3-201ENST00000363816 102 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 SNORD115-7-201ENST00000365306 82 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 Y_RNA.576-201ENST00000384781 102 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 RNU6-1197P-201ENST00000391183 107 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.3□□□□□ -1.88
CTPS1P17812 AL158156.1-201ENST00000422509 473 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 MTCYBP8-201ENST00000422855 651 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 TMEM167AP1-201ENST00000423409 219 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.3□□□□□ -1.88
CTPS1P17812 BX679664.1-201ENST00000434429 253 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 HMGN2P20-201ENST00000437531 273 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.3□□□□□ -1.88
CTPS1P17812 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.3□□□□□ -1.88
CTPS1P17812 AC073415.1-201ENST00000449240 153 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
CTPS1P17812 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.3□□□□□ -1.88
CTPS1P17812 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.3□□□□□ -1.88
CTPS1P17812 RPL31P58-201ENST00000469001 379 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 RPS20P22-201ENST00000473700 357 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CTPS1P17812 RNU6-123P-201ENST00000516163 102 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 RN7SKP219-201ENST00000516825 296 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 CASP1P1-201ENST00000526345 212 ntBASIC3.3□□□□□ -1.88
CTPS1P17812 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.3□□□□□ -1.88
CTPS1P17812 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.3□□□□□ -1.88
CTPS1P17812 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms