Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.81□□□□□ -2.12
CD28P10747 HMGB1P41-201ENST00000520234 440 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 IGKV3-31-201ENST00000523109 329 ntBASIC1.81□□□□□ -2.12
CD28P10747 MTCYBP20-201ENST00000524239 1129 ntBASIC1.81□□□□□ -2.12
CD28P10747 AP004247.1-201ENST00000531556 1289 ntBASIC1.81□□□□□ -2.12
CD28P10747 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CD28P10747 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 AL049838.1-201ENST00000563647 981 ntBASIC1.81□□□□□ -2.12
CD28P10747 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 AL355877.2-201ENST00000603670 358 ntBASIC1.81□□□□□ -2.12
CD28P10747 MTND4LP5-201ENST00000605152 292 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC004805.2-201ENST00000605382 482 ntBASIC1.81□□□□□ -2.12
CD28P10747 AL355472.4-201ENST00000610233 626 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC092106.3-201ENST00000611308 722 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC025594.3-201ENST00000613068 790 ntBASIC1.81□□□□□ -2.12
CD28P10747 AL139418.1-201ENST00000613613 177 ntBASIC1.81□□□□□ -2.12
CD28P10747 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.81□□□□□ -2.12
CD28P10747 AC009159.1-201ENST00000618386 642 ntBASIC1.81□□□□□ -2.12
CD28P10747 AL356596.1-201ENST00000624230 379 ntBASIC1.81□□□□□ -2.12
CD28P10747 AC091965.5-201ENST00000624785 342 ntBASIC1.81□□□□□ -2.12
CD28P10747 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.81□□□□□ -2.12
CD28P10747 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CD28P10747 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
CD28P10747 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.8□□□□□ -2.12
CD28P10747 AL391994.1-201ENST00000254724 282 ntBASIC1.8□□□□□ -2.12
CD28P10747 RNU5A-8P-201ENST00000364102 114 ntBASIC1.8□□□□□ -2.12
CD28P10747 Y_RNA.245-201ENST00000364493 95 ntBASIC1.8□□□□□ -2.12
CD28P10747 MIR513B-201ENST00000385136 84 ntBASIC1.8□□□□□ -2.12
CD28P10747 RNU6-584P-201ENST00000410350 95 ntBASIC1.8□□□□□ -2.12
CD28P10747 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.8□□□□□ -2.12
CD28P10747 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.8□□□□□ -2.12
CD28P10747 RPS15AP28-201ENST00000435088 386 ntBASIC1.8□□□□□ -2.12
CD28P10747 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.8□□□□□ -2.12
CD28P10747 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
CD28P10747 RPL23AP35-201ENST00000451906 501 ntBASIC1.8□□□□□ -2.12
CD28P10747 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CD28P10747 RPL23AP41-201ENST00000484754 458 ntBASIC1.8□□□□□ -2.12
CD28P10747 HSPE1P23-201ENST00000509838 286 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.8□□□□□ -2.12
CD28P10747 SCARNA17.1-201ENST00000516211 143 ntBASIC1.8□□□□□ -2.12
CD28P10747 SCARNA17.2-201ENST00000516334 143 ntBASIC1.8□□□□□ -2.12
CD28P10747 RNU6-703P-201ENST00000516946 107 ntBASIC1.8□□□□□ -2.12
CD28P10747 RNA5SP471-201ENST00000516971 106 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.8□□□□□ -2.12
CD28P10747 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.8□□□□□ -2.12
CD28P10747 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.8□□□□□ -2.12
CD28P10747 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CD28P10747 MIR3908-201ENST00000579798 126 ntBASIC1.8□□□□□ -2.12
CD28P10747 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
CD28P10747 BNIP3P39-201ENST00000601077 554 ntBASIC1.8□□□□□ -2.12
CD28P10747 AL158827.2-201ENST00000602494 330 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC098826.3-201ENST00000603823 466 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC013244.3-201ENST00000605614 388 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC092953.2-201ENST00000608000 699 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC013562.2-201ENST00000611632 603 ntBASIC1.8□□□□□ -2.12
CD28P10747 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CD28P10747 SCARNA17.4-201ENST00000614296 143 ntBASIC1.8□□□□□ -2.12
CD28P10747 AL078595.3-201ENST00000623815 1166 ntBASIC1.8□□□□□ -2.12
CD28P10747 AC079416.3-201ENST00000624479 549 ntBASIC1.8□□□□□ -2.12
CD28P10747 AL691447.3-201ENST00000635020 330 ntBASIC1.8□□□□□ -2.12
CD28P10747 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.8□□□□□ -2.12
CD28P10747 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CD28P10747 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CD28P10747 RNY4P24-201ENST00000362735 96 ntBASIC1.79□□□□□ -2.12
CD28P10747 SNORA67.1-201ENST00000364749 141 ntBASIC1.79□□□□□ -2.12
CD28P10747 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CD28P10747 RNU2-49P-201ENST00000410666 184 ntBASIC1.79□□□□□ -2.12
CD28P10747 RNU6-1328P-201ENST00000410938 106 ntBASIC1.79□□□□□ -2.12
CD28P10747 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.79□□□□□ -2.12
CD28P10747 SSR1P2-201ENST00000415208 787 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.79□□□□□ -2.12
CD28P10747 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.79□□□□□ -2.12
CD28P10747 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.79□□□□□ -2.12
CD28P10747 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.79□□□□□ -2.12
CD28P10747 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.79□□□□□ -2.12
CD28P10747 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.79□□□□□ -2.12
CD28P10747 MICF-203ENST00000432679 129 ntBASIC1.79□□□□□ -2.12
CD28P10747 CR769767.1-201ENST00000436337 346 ntBASIC1.79□□□□□ -2.12
CD28P10747 AL445687.1-201ENST00000439946 251 ntBASIC1.79□□□□□ -2.12
CD28P10747 OSTCP8-201ENST00000445117 448 ntBASIC1.79□□□□□ -2.12
CD28P10747 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.79□□□□□ -2.12
CD28P10747 COX6CP12-201ENST00000446748 202 ntBASIC1.79□□□□□ -2.12
CD28P10747 DPPA3P1-201ENST00000448050 469 ntBASIC1.79□□□□□ -2.12
CD28P10747 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.79□□□□□ -2.12
CD28P10747 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.79□□□□□ -2.12
CD28P10747 AC133134.1-201ENST00000466800 359 ntBASIC1.79□□□□□ -2.12
CD28P10747 RPL9P6-201ENST00000492764 598 ntBASIC1.79□□□□□ -2.12
CD28P10747 AC091951.3-201ENST00000504093 246 ntBASIC1.79□□□□□ -2.12
CD28P10747 RPF2P2-201ENST00000504693 896 ntBASIC1.79□□□□□ -2.12
CD28P10747 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms