Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC026371.1-201ENST00000551867 419 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 AC005899.2-201ENST00000584353 90 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 AC012433.1-201ENST00000588916 398 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 RNU5A-1-201ENST00000362698 116 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-187P-201ENST00000384139 106 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.518-201ENST00000384552 113 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AL160275.3-201ENST00000423876 471 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 RPL23AP25-201ENST00000430973 463 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 PRDX3P3-201ENST00000447765 522 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 DEFB109F-201ENST00000491870 277 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC096745.1-201ENST00000509945 370 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-307P-201ENST00000516743 106 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 SNORA81.3-201ENST00000517283 198 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 SNRPGP15-201ENST00000600149 222 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 BMS1P21-201ENST00000634565 365 ntBASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CSB-PGBD3P0DP91 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CSB-PGBD3P0DP91 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-746P-201ENST00000384112 109 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AC097713.2-201ENST00000430199 356 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AC010285.1-201ENST00000470580 392 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 SNORA25.11-201ENST00000515935 105 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AL606490.9-201ENST00000603331 271 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AL160290.3-201ENST00000604869 165 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AC091905.2-201ENST00000623143 306 ntBASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CSB-PGBD3P0DP91 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RNY3P11-201ENST00000364153 102 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RNA5SP387-201ENST00000364226 106 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 MIR200C-201ENST00000384980 68 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 AL590704.1-201ENST00000402856 794 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 SNORA11.1-201ENST00000408133 129 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RNU2-14P-201ENST00000411053 191 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RAC1P3-201ENST00000416129 580 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 GOT2P5-201ENST00000433995 546 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RPL7P5-201ENST00000471472 736 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 SNORA40.14-201ENST00000516543 86 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-570P-201ENST00000517051 105 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RPL23AP87-202ENST00000573039 466 ntBASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CSB-PGBD3P0DP91 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AC008669.1-201ENST00000565823 2178 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.19-201ENST00000362462 99 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 SNORA71.3-201ENST00000362582 128 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.478-201ENST00000384358 107 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 RNA5SP372-201ENST00000390836 115 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AL592291.1-201ENST00000403830 352 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 RPS4XP7-201ENST00000406274 780 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms