Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 C1DP2-201ENST00000418167 426 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB1P09429 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGB1P09429 ELOCP23-201ENST00000452014 332 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 snoU109.2-201ENST00000459316 135 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC010401.1-201ENST00000463867 348 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC011005.2-201ENST00000487324 359 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 RPL21P13-201ENST00000488305 481 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC117522.2-201ENST00000510049 657 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC112206.3-201ENST00000514578 389 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB1P09429 AP001646.1-201ENST00000527936 915 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB1P09429 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB1P09429 AC092325.1-201ENST00000566449 554 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC138761.3-201ENST00000579993 334 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC008521.1-201ENST00000587471 187 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC040904.1-201ENST00000590850 223 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 Z84480.1-201ENST00000605131 311 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AC010678.1-201ENST00000614118 713 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB1P09429 AC034229.5-201ENST00000624258 185 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 U6.114-201ENST00000636407 96 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 AL109809.4-201ENST00000603520 2185 ntBASIC4.03□□□□□ -1.76
HMGB1P09429 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
HMGB1P09429 RNU6-1072P-201ENST00000384703 107 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 RNU6-443P-201ENST00000384780 107 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 MIR518D-201ENST00000385014 87 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 Y_RNA.623-201ENST00000411128 95 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 NDUFB4P5-201ENST00000415445 361 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AL365338.1-201ENST00000422282 858 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 BX276092.3-201ENST00000424182 230 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 RPL30P4-201ENST00000429309 333 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 GPR143P-201ENST00000434155 205 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB1P09429 MTCYBP1-201ENST00000454315 1119 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB1P09429 AL672167.3-201ENST00000465951 960 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AC004924.1-201ENST00000480160 781 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AC103975.1-201ENST00000482506 483 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 RPL36AP48-201ENST00000485521 314 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB1P09429 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 Y_RNA.695-201ENST00000516715 107 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 OR5AL2P-201ENST00000532185 920 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 OR5B10P-201ENST00000532869 642 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB1P09429 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB1P09429 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB1P09429 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB1P09429 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HMGB1P09429 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB1P09429 AC245014.2-201ENST00000603689 287 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 AC246785.4-201ENST00000605374 287 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 LRRC77P-213ENST00000637727 880 ntBASIC4.02□□□□□ -1.77
HMGB1P09429 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB1P09429 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
HMGB1P09429 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HMGB1P09429 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB1P09429 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB1P09429 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 MIR412-201ENST00000362142 91 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 RNU1-100P-201ENST00000365255 165 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 RNY3P9-201ENST00000384727 106 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 RNA5SP31-201ENST00000411144 127 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AL356968.1-201ENST00000416622 474 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGB1P09429 AC244505.5-201ENST00000443639 207 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AC079781.2-201ENST00000446424 169 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB1P09429 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB1P09429 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB1P09429 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB1P09429 RPL22P13-201ENST00000493291 347 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AC008716.1-201ENST00000511084 513 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 RNA5SP112-201ENST00000515937 99 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 MIR2276-201ENST00000516886 89 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AC023632.4-201ENST00000517783 191 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGB1P09429 AC010186.2-204ENST00000537668 439 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGB1P09429 AC037471.2-201ENST00000564941 598 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 AC023824.2-201ENST00000566185 400 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 MIR4658-201ENST00000584344 65 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGB1P09429 AC093648.1-201ENST00000623546 606 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGB1P09429 MIR3974-201ENST00000637126 96 ntBASIC4.01□□□□□ -1.77
HMGB1P09429 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGB1P09429 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
HMGB1P09429 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4□□□□□ -1.77
HMGB1P09429 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms